RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 KRTAP5-9P26371 169 aa9.08□□□□□ -0.96
U2AF1-208ENST00000471250 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.07□□□□□ -0.96
U2AF1-208ENST00000471250 KRTAP19-3Q7Z4W3 81 aa9.04□□□□□ -0.96
U2AF1-208ENST00000471250 SYNE2Q8WXH0 6885 aaKnown RBP9.03□□□□□ -0.96
U2AF1-208ENST00000471250 MUC12Q9UKN1 5478 aa8.99□□□□□ -0.97
U2AF1-208ENST00000471250 MT1GP13640 62 aa8.97□□□□□ -0.97
U2AF1-208ENST00000471250 KRTAP4-7Q9BYR0 210 aa8.94□□□□□ -0.98
U2AF1-208ENST00000471250 KRTAP6-3Q3LI67 103 aa8.91□□□□□ -0.98
U2AF1-208ENST00000471250 LUZP6Q538Z0 58 aa8.88□□□□□ -0.99
U2AF1-208ENST00000471250 LCE5AQ5TCM9 118 aa8.88□□□□□ -0.99
U2AF1-208ENST00000471250 MT1MQ8N339 61 aa8.87□□□□□ -0.99
U2AF1-208ENST00000471250 LCE1AQ5T7P2 110 aa8.79□□□□□ -1
U2AF1-208ENST00000471250 NDUFAF8A1L188 74 aa8.72□□□□□ -1.01
U2AF1-208ENST00000471250 SPRR2EP22531 72 aa8.71□□□□□ -1.02
U2AF1-208ENST00000471250 SPRR2BP35325 72 aa8.71□□□□□ -1.02
U2AF1-208ENST00000471250 SPRR2AP35326 72 aa8.71□□□□□ -1.02
U2AF1-208ENST00000471250 KRTAP4-3Q9BYR4 195 aa8.69□□□□□ -1.02
U2AF1-208ENST00000471250 KRTAP9-6A8MVA2 160 aa8.65□□□□□ -1.02
U2AF1-208ENST00000471250 MDN1Q9NU22 5596 aa8.62□□□□□ -1.03
U2AF1-208ENST00000471250 KRTAP9-7A8MTY7 169 aa8.55□□□□□ -1.04
U2AF1-208ENST00000471250 SPRR2DP22532 72 aa8.39□□□□□ -1.07
U2AF1-208ENST00000471250 LCE3BQ5TA77 95 aa8.31□□□□□ -1.08
U2AF1-208ENST00000471250 NEBP20929 6669 aa8.25□□□□□ -1.09
U2AF1-208ENST00000471250 KRTAP4-12Q9BQ66 201 aa8.24□□□□□ -1.09
U2AF1-208ENST00000471250 DSTQ03001 7570 aaKnown RBP8.24□□□□□ -1.09
U2AF1-208ENST00000471250 KRTAP9-9Q9BYP9 154 aa8.14□□□□□ -1.11
U2AF1-208ENST00000471250 KRTAP9-4Q9BYQ2 154 aa8.14□□□□□ -1.11
U2AF1-208ENST00000471250 KRTAP2-3P0C7H8 128 aa8.02□□□□□ -1.13
U2AF1-208ENST00000471250 KRTAP2-4Q9BYR9 128 aa8.02□□□□□ -1.13
U2AF1-208ENST00000471250 KRTAP2-1Q9BYU5 128 aa8.02□□□□□ -1.13
U2AF1-208ENST00000471250 KRTAP5-5Q701N2 237 aaPredicted RBP7.99□□□□□ -1.13
U2AF1-208ENST00000471250 MT1AP04731 61 aa7.86□□□□□ -1.15
U2AF1-208ENST00000471250 KRTAP6-1Q3LI64 71 aa7.78□□□□□ -1.16
U2AF1-208ENST00000471250 LCE1DQ5T752 114 aa7.77□□□□□ -1.17
U2AF1-208ENST00000471250 H3BS24 57 aa7.67□□□□□ -1.18
U2AF1-208ENST00000471250 A0A0A0MQY5 61 aa7.65□□□□□ -1.18
U2AF1-208ENST00000471250 KRTAP5-4Q6L8H1 288 aa7.61□□□□□ -1.19
U2AF1-208ENST00000471250 KRTAP2-2Q9BYT5 123 aa7.61□□□□□ -1.19
U2AF1-208ENST00000471250 KRTAP20-1Q3LI63 56 aa7.6□□□□□ -1.19
U2AF1-208ENST00000471250 KRTAP4-9Q9BYQ8 210 aa7.59□□□□□ -1.19
U2AF1-208ENST00000471250 SYNE1Q8NF91 8797 aaKnown RBP7.52□□□□□ -1.21
U2AF1-208ENST00000471250 KRTAP4-2Q9BYR5 136 aa7.48□□□□□ -1.21
U2AF1-208ENST00000471250 LCE4AQ5TA78 99 aa7.46□□□□□ -1.22
U2AF1-208ENST00000471250 KRTAP12-4P60329 112 aa7.39□□□□□ -1.23
U2AF1-208ENST00000471250 MT4P47944 62 aa7.27□□□□□ -1.25
U2AF1-208ENST00000471250 KRTAP4-11Q9BYQ6 195 aa7.26□□□□□ -1.25
U2AF1-208ENST00000471250 INE1O15225 51 aa7.2□□□□□ -1.26
U2AF1-208ENST00000471250 KRTAP6-2Q3LI66 62 aa7.15□□□□□ -1.27
U2AF1-208ENST00000471250 MT3P25713 68 aa7.11□□□□□ -1.27
U2AF1-208ENST00000471250 KRTAP20-2Q3LI61 65 aa7.11□□□□□ -1.27
U2AF1-208ENST00000471250 HMCN1Q96RW7 5635 aa6.96□□□□□ -1.29
U2AF1-208ENST00000471250 KRTAP5-2Q701N4 177 aa6.92□□□□□ -1.3
U2AF1-208ENST00000471250 KRTAP5-3Q6L8H2 238 aa6.87□□□□□ -1.31
U2AF1-208ENST00000471250 LCE3DQ9BYE3 92 aa6.87□□□□□ -1.31
U2AF1-208ENST00000471250 LCE3EQ5T5B0 92 aa6.69□□□□□ -1.34
U2AF1-208ENST00000471250 OBSCNQ5VST9 7968 aa6.48□□□□□ -1.37
U2AF1-208ENST00000471250 AHNAK2Q8IVF2 5795 aa6.18□□□□□ -1.42
U2AF1-208ENST00000471250 LCE1EQ5T753 118 aa6.17□□□□□ -1.42
U2AF1-208ENST00000471250 GPR98Q8WXG9 6306 aa6.12□□□□□ -1.43
U2AF1-208ENST00000471250 KRTAP5-1Q6L8H4 278 aa5.97□□□□□ -1.45
U2AF1-208ENST00000471250 KRTAP5-8O75690 187 aa5.91□□□□□ -1.46
U2AF1-208ENST00000471250 KRTAP5-10Q6L8G5 202 aa5.9□□□□□ -1.47
U2AF1-208ENST00000471250 PRM1P04553 51 aa5.85□□□□□ -1.47
U2AF1-208ENST00000471250 LCE1BQ5T7P3 118 aa5.78□□□□□ -1.48
U2AF1-208ENST00000471250 KRTAP5-7Q6L8G8 165 aa5.75□□□□□ -1.49
U2AF1-208ENST00000471250 LCE1CQ5T751 118 aa5.74□□□□□ -1.49
U2AF1-208ENST00000471250 MUC5ACP98088 5654 aa5.69□□□□□ -1.5
U2AF1-208ENST00000471250 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.39□□□□□ -1.55
U2AF1-208ENST00000471250 KRTAP21-2Q3LI59 83 aa5.09□□□□□ -1.59
U2AF1-208ENST00000471250 KRTAP5-11Q6L8G4 156 aa5.06□□□□□ -1.6
U2AF1-208ENST00000471250 MUC5BQ9HC84 5762 aaPredicted RBP5.02□□□□□ -1.61
U2AF1-208ENST00000471250 AHNAKQ09666 5890 aaKnown RBP4.68□□□□□ -1.66
U2AF1-208ENST00000471250 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
U2AF1-208ENST00000471250 KRTAP4-4Q9BYR3 166 aa4.51□□□□□ -1.69
U2AF1-208ENST00000471250 PHGR1C9JFL3 82 aa4.34□□□□□ -1.71
U2AF1-208ENST00000471250 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
U2AF1-208ENST00000471250 KRTAP21-1Q3LI58 79 aa3.59□□□□□ -1.83
U2AF1-208ENST00000471250 MUC16Q8WXI7 14507 aa2.81□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 64.7 ms