RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 DSTQ03001 7570 aaKnown RBP4.89□□□□□ -1.63
CCNL1-213ENST00000471044 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
CCNL1-213ENST00000471044 NDUFAF8A1L188 74 aa4.82□□□□□ -1.64
CCNL1-213ENST00000471044 CAMK2N1Q7Z7J9 78 aa4.81□□□□□ -1.64
CCNL1-213ENST00000471044 SEC61GP60059 68 aa4.79□□□□□ -1.64
CCNL1-213ENST00000471044 SERP1Q9Y6X1 66 aa4.78□□□□□ -1.64
CCNL1-213ENST00000471044 A0A0D9SG42 100 aa4.72□□□□□ -1.65
CCNL1-213ENST00000471044 SPATA8Q6RVD6 105 aa4.72□□□□□ -1.65
CCNL1-213ENST00000471044 A0A1B0GU33 70 aa4.71□□□□□ -1.66
CCNL1-213ENST00000471044 ATP5EP56381 51 aaPredicted RBP4.71□□□□□ -1.66
CCNL1-213ENST00000471044 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
CCNL1-213ENST00000471044 A0A1B0GU69 56 aa4.67□□□□□ -1.66
CCNL1-213ENST00000471044 SPINT4Q6UDR6 99 aa4.67□□□□□ -1.66
CCNL1-213ENST00000471044 MT1EP04732 61 aa4.65□□□□□ -1.67
CCNL1-213ENST00000471044 KRTAP12-1P59990 96 aa4.65□□□□□ -1.67
CCNL1-213ENST00000471044 TMEM258P61165 79 aa4.64□□□□□ -1.67
CCNL1-213ENST00000471044 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
CCNL1-213ENST00000471044 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
CCNL1-213ENST00000471044 SMIM26A0A096LP01 95 aa4.58□□□□□ -1.68
CCNL1-213ENST00000471044 PRR15LQ9BU68 103 aa4.58□□□□□ -1.68
CCNL1-213ENST00000471044 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
CCNL1-213ENST00000471044 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
CCNL1-213ENST00000471044 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
CCNL1-213ENST00000471044 A8MU10 97 aa4.53□□□□□ -1.68
CCNL1-213ENST00000471044 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
CCNL1-213ENST00000471044 MT1GP13640 62 aa4.51□□□□□ -1.69
CCNL1-213ENST00000471044 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
CCNL1-213ENST00000471044 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
CCNL1-213ENST00000471044 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
CCNL1-213ENST00000471044 MT4P47944 62 aa4.46□□□□□ -1.7
CCNL1-213ENST00000471044 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
CCNL1-213ENST00000471044 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.7
CCNL1-213ENST00000471044 TNP1P09430 55 aa4.45□□□□□ -1.7
CCNL1-213ENST00000471044 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
CCNL1-213ENST00000471044 MT1LQ93083 61 aa4.44□□□□□ -1.7
CCNL1-213ENST00000471044 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
CCNL1-213ENST00000471044 MT1MQ8N339 61 aa4.42□□□□□ -1.7
CCNL1-213ENST00000471044 UQCR11O14957 56 aa4.41□□□□□ -1.7
CCNL1-213ENST00000471044 V9GYY9 64 aa4.37□□□□□ -1.71
CCNL1-213ENST00000471044 PSPHP1O15172 72 aa4.36□□□□□ -1.71
CCNL1-213ENST00000471044 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.71
CCNL1-213ENST00000471044 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
CCNL1-213ENST00000471044 Q1T7F1 81 aa4.33□□□□□ -1.72
CCNL1-213ENST00000471044 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
CCNL1-213ENST00000471044 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
CCNL1-213ENST00000471044 K7ERS5 55 aa4.24□□□□□ -1.73
CCNL1-213ENST00000471044 A6NED7 52 aa4.22□□□□□ -1.73
CCNL1-213ENST00000471044 RPS28P62857 69 aaKnown RBP4.21□□□□□ -1.74
CCNL1-213ENST00000471044 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
CCNL1-213ENST00000471044 KRTAP5-2Q701N4 177 aa4.14□□□□□ -1.75
CCNL1-213ENST00000471044 KRTAP5-5Q701N2 237 aaPredicted RBP4.07□□□□□ -1.76
CCNL1-213ENST00000471044 KRTAP20-2Q3LI61 65 aa4.04□□□□□ -1.76
CCNL1-213ENST00000471044 CDC42SE1Q9NRR8 79 aa4.03□□□□□ -1.76
CCNL1-213ENST00000471044 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
CCNL1-213ENST00000471044 ROMO1P60602 79 aa3.96□□□□□ -1.78
CCNL1-213ENST00000471044 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.78
CCNL1-213ENST00000471044 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
CCNL1-213ENST00000471044 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
CCNL1-213ENST00000471044 MUC5ACP98088 5654 aa3.84□□□□□ -1.8
CCNL1-213ENST00000471044 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
CCNL1-213ENST00000471044 BRK1Q8WUW1 75 aa3.8□□□□□ -1.8
CCNL1-213ENST00000471044 MT1AP04731 61 aa3.79□□□□□ -1.8
CCNL1-213ENST00000471044 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
CCNL1-213ENST00000471044 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
CCNL1-213ENST00000471044 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
CCNL1-213ENST00000471044 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
CCNL1-213ENST00000471044 PMAIP1Q13794 54 aa3.56□□□□□ -1.84
CCNL1-213ENST00000471044 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
CCNL1-213ENST00000471044 PRO0628Q9UI54 55 aa3.4□□□□□ -1.87
CCNL1-213ENST00000471044 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
CCNL1-213ENST00000471044 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
CCNL1-213ENST00000471044 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
CCNL1-213ENST00000471044 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
CCNL1-213ENST00000471044 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
CCNL1-213ENST00000471044 INE1O15225 51 aa2.18□□□□□ -2.06
CCNL1-213ENST00000471044 PRM1P04553 51 aa2.05□□□□□ -2.08
CCNL1-213ENST00000471044 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
CCNL1-213ENST00000471044 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 25.4 ms