RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 MT1LQ93083 61 aa5.59□□□□□ -1.51
HDAC6-218ENST00000470942 PRO0628Q9UI54 55 aa5.59□□□□□ -1.51
HDAC6-218ENST00000470942 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
HDAC6-218ENST00000470942 Q1T7F1 81 aa5.57□□□□□ -1.52
HDAC6-218ENST00000470942 MT1MQ8N339 61 aa5.56□□□□□ -1.52
HDAC6-218ENST00000470942 V9GYY9 64 aa5.54□□□□□ -1.52
HDAC6-218ENST00000470942 PSPHP1O15172 72 aa5.51□□□□□ -1.53
HDAC6-218ENST00000470942 K7ERS5 55 aa5.49□□□□□ -1.53
HDAC6-218ENST00000470942 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
HDAC6-218ENST00000470942 KRTAP12-3P60328 96 aa5.45□□□□□ -1.54
HDAC6-218ENST00000470942 KRTAP4-3Q9BYR4 195 aa5.44□□□□□ -1.54
HDAC6-218ENST00000470942 KRTAP25-1Q3LHN0 102 aa5.42□□□□□ -1.54
HDAC6-218ENST00000470942 BRK1Q8WUW1 75 aa5.36□□□□□ -1.55
HDAC6-218ENST00000470942 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
HDAC6-218ENST00000470942 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
HDAC6-218ENST00000470942 A6NED7 52 aa5.33□□□□□ -1.56
HDAC6-218ENST00000470942 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
HDAC6-218ENST00000470942 MT4P47944 62 aa5.31□□□□□ -1.56
HDAC6-218ENST00000470942 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
HDAC6-218ENST00000470942 KRTAP5-4Q6L8H1 288 aa5.23□□□□□ -1.57
HDAC6-218ENST00000470942 GPR98Q8WXG9 6306 aa5.22□□□□□ -1.57
HDAC6-218ENST00000470942 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
HDAC6-218ENST00000470942 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
HDAC6-218ENST00000470942 CDC42SE1Q9NRR8 79 aa5.18□□□□□ -1.58
HDAC6-218ENST00000470942 KRTAP4-6Q9BYQ5 205 aa5.15□□□□□ -1.59
HDAC6-218ENST00000470942 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
HDAC6-218ENST00000470942 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
HDAC6-218ENST00000470942 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
HDAC6-218ENST00000470942 ROMO1P60602 79 aa5.1□□□□□ -1.59
HDAC6-218ENST00000470942 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
HDAC6-218ENST00000470942 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
HDAC6-218ENST00000470942 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
HDAC6-218ENST00000470942 LCE3CQ5T5A8 94 aa5.02□□□□□ -1.61
HDAC6-218ENST00000470942 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
HDAC6-218ENST00000470942 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
HDAC6-218ENST00000470942 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
HDAC6-218ENST00000470942 KRTAP5-10Q6L8G5 202 aa4.91□□□□□ -1.62
HDAC6-218ENST00000470942 SYNE1Q8NF91 8797 aaKnown RBP4.87□□□□□ -1.63
HDAC6-218ENST00000470942 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
HDAC6-218ENST00000470942 MT1AP04731 61 aa4.75□□□□□ -1.65
HDAC6-218ENST00000470942 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
HDAC6-218ENST00000470942 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
HDAC6-218ENST00000470942 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.66
HDAC6-218ENST00000470942 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
HDAC6-218ENST00000470942 KRTAP9-4Q9BYQ2 154 aa4.6□□□□□ -1.67
HDAC6-218ENST00000470942 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
HDAC6-218ENST00000470942 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
HDAC6-218ENST00000470942 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
HDAC6-218ENST00000470942 H3BS24 57 aa4.39□□□□□ -1.71
HDAC6-218ENST00000470942 MT3P25713 68 aa4.36□□□□□ -1.71
HDAC6-218ENST00000470942 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
HDAC6-218ENST00000470942 OBSCNQ5VST9 7968 aa4.28□□□□□ -1.72
HDAC6-218ENST00000470942 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
HDAC6-218ENST00000470942 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
HDAC6-218ENST00000470942 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
HDAC6-218ENST00000470942 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
HDAC6-218ENST00000470942 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
HDAC6-218ENST00000470942 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
HDAC6-218ENST00000470942 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
HDAC6-218ENST00000470942 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
HDAC6-218ENST00000470942 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
HDAC6-218ENST00000470942 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
HDAC6-218ENST00000470942 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
HDAC6-218ENST00000470942 LCE1CQ5T751 118 aa3.68□□□□□ -1.82
HDAC6-218ENST00000470942 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
HDAC6-218ENST00000470942 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
HDAC6-218ENST00000470942 INE1O15225 51 aa3.42□□□□□ -1.86
HDAC6-218ENST00000470942 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
HDAC6-218ENST00000470942 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
HDAC6-218ENST00000470942 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
HDAC6-218ENST00000470942 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
HDAC6-218ENST00000470942 KRTAP21-2Q3LI59 83 aa3.1□□□□□ -1.91
HDAC6-218ENST00000470942 PHGR1C9JFL3 82 aa2.88□□□□□ -1.95
HDAC6-218ENST00000470942 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
HDAC6-218ENST00000470942 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
HDAC6-218ENST00000470942 PRM1P04553 51 aa2.62□□□□□ -1.99
HDAC6-218ENST00000470942 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
HDAC6-218ENST00000470942 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 98 ms