RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 KRTAP4-3Q9BYR4 195 aa2.33□□□□□ -2.04
SF3A3-205ENST00000470585 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
SF3A3-205ENST00000470585 LINC00643Q86TS7 51 aa2.31□□□□□ -2.04
SF3A3-205ENST00000470585 KRTAP13-4Q3LI77 160 aa2.29□□□□□ -2.04
SF3A3-205ENST00000470585 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
SF3A3-205ENST00000470585 CHKB-CPT1BH3BT56 60 aa2.27□□□□□ -2.05
SF3A3-205ENST00000470585 C10orf95Q9H7T3 257 aa2.27□□□□□ -2.05
SF3A3-205ENST00000470585 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
SF3A3-205ENST00000470585 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
SF3A3-205ENST00000470585 MUC5ACP98088 5654 aa2.21□□□□□ -2.06
SF3A3-205ENST00000470585 SCGB1A1P11684 91 aa2.21□□□□□ -2.06
SF3A3-205ENST00000470585 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
SF3A3-205ENST00000470585 TNP1P09430 55 aa2.19□□□□□ -2.06
SF3A3-205ENST00000470585 KRTAP12-1P59990 96 aa2.18□□□□□ -2.06
SF3A3-205ENST00000470585 SEC61GP60059 68 aa2.18□□□□□ -2.06
SF3A3-205ENST00000470585 SPINT4Q6UDR6 99 aa2.18□□□□□ -2.06
SF3A3-205ENST00000470585 SMIM20Q8N5G0 67 aa2.17□□□□□ -2.06
SF3A3-205ENST00000470585 SPANXA2-OT1Q8N9U9 137 aa2.17□□□□□ -2.06
SF3A3-205ENST00000470585 LCE1FQ5T754 118 aa2.16□□□□□ -2.06
SF3A3-205ENST00000470585 SERP1Q9Y6X1 66 aa2.16□□□□□ -2.06
SF3A3-205ENST00000470585 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
SF3A3-205ENST00000470585 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
SF3A3-205ENST00000470585 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
SF3A3-205ENST00000470585 A0A1B0GU33 70 aa2.13□□□□□ -2.07
SF3A3-205ENST00000470585 SMIM26A0A096LP01 95 aa2.12□□□□□ -2.07
SF3A3-205ENST00000470585 SPATA8Q6RVD6 105 aa2.12□□□□□ -2.07
SF3A3-205ENST00000470585 LOC105371267A0A1B0GV96 52 aa2.11□□□□□ -2.07
SF3A3-205ENST00000470585 LCE3CQ5T5A8 94 aa2.1□□□□□ -2.07
SF3A3-205ENST00000470585 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
SF3A3-205ENST00000470585 J3QR89 54 aa2.07□□□□□ -2.08
SF3A3-205ENST00000470585 MT1AP04731 61 aa2.05□□□□□ -2.08
SF3A3-205ENST00000470585 COA5Q86WW8 74 aa2.05□□□□□ -2.08
SF3A3-205ENST00000470585 SNURFQ9Y675 71 aa2.02□□□□□ -2.09
SF3A3-205ENST00000470585 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
SF3A3-205ENST00000470585 SERP2Q8N6R1 65 aa1.98□□□□□ -2.09
SF3A3-205ENST00000470585 A0A1B0GU69 56 aa1.97□□□□□ -2.09
SF3A3-205ENST00000470585 A8MU10 97 aa1.97□□□□□ -2.09
SF3A3-205ENST00000470585 KRTAP25-1Q3LHN0 102 aa1.97□□□□□ -2.09
SF3A3-205ENST00000470585 KRTAP6-2Q3LI66 62 aa1.97□□□□□ -2.09
SF3A3-205ENST00000470585 PCP4L1A6NKN8 68 aa1.93□□□□□ -2.1
SF3A3-205ENST00000470585 NDUFAF8A1L188 74 aa1.91□□□□□ -2.1
SF3A3-205ENST00000470585 LCE3EQ5T5B0 92 aa1.91□□□□□ -2.1
SF3A3-205ENST00000470585 PRAC1Q96KF2 57 aa1.91□□□□□ -2.1
SF3A3-205ENST00000470585 PRR15LQ9BU68 103 aa1.91□□□□□ -2.1
SF3A3-205ENST00000470585 A0A1B0GV90 55 aa1.88□□□□□ -2.11
SF3A3-205ENST00000470585 H7BZZ5 65 aa1.87□□□□□ -2.11
SF3A3-205ENST00000470585 K7ERU9 68 aa1.84□□□□□ -2.11
SF3A3-205ENST00000470585 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
SF3A3-205ENST00000470585 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
SF3A3-205ENST00000470585 UQCR11O14957 56 aa1.8□□□□□ -2.12
SF3A3-205ENST00000470585 COX7CP15954 63 aa1.79□□□□□ -2.12
SF3A3-205ENST00000470585 K7ERS5 55 aa1.78□□□□□ -2.12
SF3A3-205ENST00000470585 LINC01558Q9Y6Z2 57 aa1.76□□□□□ -2.13
SF3A3-205ENST00000470585 ATP5EP56381 51 aaPredicted RBP1.7□□□□□ -2.14
SF3A3-205ENST00000470585 RPS28P62857 69 aaKnown RBP1.7□□□□□ -2.14
SF3A3-205ENST00000470585 MIR22HGQ0VDD5 57 aa1.69□□□□□ -2.14
SF3A3-205ENST00000470585 CDC42SE1Q9NRR8 79 aa1.62□□□□□ -2.15
SF3A3-205ENST00000470585 Q1T7F1 81 aa1.57□□□□□ -2.16
SF3A3-205ENST00000470585 ROMO1P60602 79 aa1.55□□□□□ -2.16
SF3A3-205ENST00000470585 ANAPC13Q9BS18 74 aa1.55□□□□□ -2.16
SF3A3-205ENST00000470585 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
SF3A3-205ENST00000470585 V9GYY9 64 aa1.53□□□□□ -2.16
SF3A3-205ENST00000470585 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
SF3A3-205ENST00000470585 TMEM258P61165 79 aa1.51□□□□□ -2.17
SF3A3-205ENST00000470585 CCDC179H3BU77 68 aa1.47□□□□□ -2.17
SF3A3-205ENST00000470585 PSPHP1O15172 72 aa1.44□□□□□ -2.18
SF3A3-205ENST00000470585 A6NED7 52 aa1.42□□□□□ -2.18
SF3A3-205ENST00000470585 LCE3DQ9BYE3 92 aa1.41□□□□□ -2.18
SF3A3-205ENST00000470585 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.19
SF3A3-205ENST00000470585 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
SF3A3-205ENST00000470585 BRK1Q8WUW1 75 aa1.02□□□□□ -2.25
SF3A3-205ENST00000470585 LUZP6Q538Z0 58 aa1.01□□□□□ -2.25
SF3A3-205ENST00000470585 PRO0628Q9UI54 55 aa1.01□□□□□ -2.25
SF3A3-205ENST00000470585 PMAIP1Q13794 54 aa0.95□□□□□ -2.26
SF3A3-205ENST00000470585 KTN1-AS1Q86SY8 53 aa0.93□□□□□ -2.26
SF3A3-205ENST00000470585 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
SF3A3-205ENST00000470585 PRM1P04553 51 aa0.73□□□□□ -2.29
SF3A3-205ENST00000470585 INE1O15225 51 aa0.66□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 134.3 ms