RNA–Protein interactions for RNA: ENST00000470543.1

HIGD1A-205, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2

Gene HIGD1A, Length 983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-205ENST00000470543 LINC00643Q86TS7 51 aa4.37□□□□□ -1.71
HIGD1A-205ENST00000470543 ANAPC13Q9BS18 74 aa4.33□□□□□ -1.72
HIGD1A-205ENST00000470543 SMIM20Q8N5G0 67 aa4.31□□□□□ -1.72
HIGD1A-205ENST00000470543 CCDC179H3BU77 68 aa4.29□□□□□ -1.72
HIGD1A-205ENST00000470543 RPS28P62857 69 aaKnown RBP4.29□□□□□ -1.72
HIGD1A-205ENST00000470543 KRTAP20-2Q3LI61 65 aa4.29□□□□□ -1.72
HIGD1A-205ENST00000470543 SPINT4Q6UDR6 99 aa4.27□□□□□ -1.73
HIGD1A-205ENST00000470543 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
HIGD1A-205ENST00000470543 C10orf95Q9H7T3 257 aa4.23□□□□□ -1.73
HIGD1A-205ENST00000470543 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
HIGD1A-205ENST00000470543 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
HIGD1A-205ENST00000470543 COX7CP15954 63 aa4.14□□□□□ -1.75
HIGD1A-205ENST00000470543 SEC61GP60059 68 aa4.14□□□□□ -1.75
HIGD1A-205ENST00000470543 TMEM258P61165 79 aa4.14□□□□□ -1.75
HIGD1A-205ENST00000470543 SPATA8Q6RVD6 105 aa4.14□□□□□ -1.75
HIGD1A-205ENST00000470543 SERP1Q9Y6X1 66 aa4.12□□□□□ -1.75
HIGD1A-205ENST00000470543 KRTAP12-1P59990 96 aa4.1□□□□□ -1.75
HIGD1A-205ENST00000470543 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
HIGD1A-205ENST00000470543 TNP1P09430 55 aa4.09□□□□□ -1.75
HIGD1A-205ENST00000470543 PRO0628Q9UI54 55 aa4.08□□□□□ -1.76
HIGD1A-205ENST00000470543 SERP2Q8N6R1 65 aa4.05□□□□□ -1.76
HIGD1A-205ENST00000470543 A0A1B0GU33 70 aa4.04□□□□□ -1.76
HIGD1A-205ENST00000470543 SNURFQ9Y675 71 aa4.04□□□□□ -1.76
HIGD1A-205ENST00000470543 AHNAKQ09666 5890 aaKnown RBP4.04□□□□□ -1.76
HIGD1A-205ENST00000470543 SPANXA2-OT1Q8N9U9 137 aa4.02□□□□□ -1.77
HIGD1A-205ENST00000470543 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
HIGD1A-205ENST00000470543 LCE1EQ5T753 118 aa4□□□□□ -1.77
HIGD1A-205ENST00000470543 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
HIGD1A-205ENST00000470543 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
HIGD1A-205ENST00000470543 COA5Q86WW8 74 aa3.97□□□□□ -1.77
HIGD1A-205ENST00000470543 MUC5ACP98088 5654 aa3.97□□□□□ -1.77
HIGD1A-205ENST00000470543 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
HIGD1A-205ENST00000470543 H7BZZ5 65 aa3.95□□□□□ -1.78
HIGD1A-205ENST00000470543 ATP5EP56381 51 aaPredicted RBP3.95□□□□□ -1.78
HIGD1A-205ENST00000470543 V9GYY9 64 aa3.93□□□□□ -1.78
HIGD1A-205ENST00000470543 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
HIGD1A-205ENST00000470543 A0A0A0MQY5 61 aa3.91□□□□□ -1.78
HIGD1A-205ENST00000470543 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
HIGD1A-205ENST00000470543 A8MU10 97 aa3.89□□□□□ -1.79
HIGD1A-205ENST00000470543 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
HIGD1A-205ENST00000470543 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
HIGD1A-205ENST00000470543 PMAIP1Q13794 54 aa3.82□□□□□ -1.8
HIGD1A-205ENST00000470543 A0A1B0GU69 56 aa3.81□□□□□ -1.8
HIGD1A-205ENST00000470543 Q1T7F1 81 aa3.81□□□□□ -1.8
HIGD1A-205ENST00000470543 BRK1Q8WUW1 75 aa3.79□□□□□ -1.8
HIGD1A-205ENST00000470543 MT1AP04731 61 aa3.74□□□□□ -1.81
HIGD1A-205ENST00000470543 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
HIGD1A-205ENST00000470543 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
HIGD1A-205ENST00000470543 KTN1-AS1Q86SY8 53 aa3.7□□□□□ -1.82
HIGD1A-205ENST00000470543 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
HIGD1A-205ENST00000470543 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
HIGD1A-205ENST00000470543 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
HIGD1A-205ENST00000470543 PRR15LQ9BU68 103 aa3.6□□□□□ -1.83
HIGD1A-205ENST00000470543 CDC42SE1Q9NRR8 79 aa3.58□□□□□ -1.84
HIGD1A-205ENST00000470543 PSPHP1O15172 72 aa3.57□□□□□ -1.84
HIGD1A-205ENST00000470543 LINC01558Q9Y6Z2 57 aa3.53□□□□□ -1.84
HIGD1A-205ENST00000470543 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
HIGD1A-205ENST00000470543 A6NED7 52 aa3.45□□□□□ -1.86
HIGD1A-205ENST00000470543 MT3P25713 68 aa3.45□□□□□ -1.86
HIGD1A-205ENST00000470543 UQCR11O14957 56 aa3.42□□□□□ -1.86
HIGD1A-205ENST00000470543 K7ERS5 55 aa3.4□□□□□ -1.87
HIGD1A-205ENST00000470543 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
HIGD1A-205ENST00000470543 MIR22HGQ0VDD5 57 aa3.31□□□□□ -1.88
HIGD1A-205ENST00000470543 ROMO1P60602 79 aa3.22□□□□□ -1.89
HIGD1A-205ENST00000470543 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
HIGD1A-205ENST00000470543 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
HIGD1A-205ENST00000470543 LCE1CQ5T751 118 aa3□□□□□ -1.93
HIGD1A-205ENST00000470543 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
HIGD1A-205ENST00000470543 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
HIGD1A-205ENST00000470543 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
HIGD1A-205ENST00000470543 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
HIGD1A-205ENST00000470543 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
HIGD1A-205ENST00000470543 INE1O15225 51 aa2.49□□□□□ -2.01
HIGD1A-205ENST00000470543 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
HIGD1A-205ENST00000470543 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
HIGD1A-205ENST00000470543 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
HIGD1A-205ENST00000470543 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
HIGD1A-205ENST00000470543 PRM1P04553 51 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms