RNA–Protein interactions for RNA: ENST00000470434.1

SBF1-205, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 2,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-205ENST00000470434 KRTAP19-7Q3SYF9 63 aa6.72□□□□□ -1.33
SBF1-205ENST00000470434 KRTAP19-4Q3LI73 84 aa6.61□□□□□ -1.35
SBF1-205ENST00000470434 SYNE2Q8WXH0 6885 aaKnown RBP6.6□□□□□ -1.35
SBF1-205ENST00000470434 KRTAP6-3Q3LI67 103 aa6.59□□□□□ -1.35
SBF1-205ENST00000470434 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
SBF1-205ENST00000470434 KRTAP9-7A8MTY7 169 aa6.58□□□□□ -1.36
SBF1-205ENST00000470434 KRTAP2-3P0C7H8 128 aa6.56□□□□□ -1.36
SBF1-205ENST00000470434 KRTAP2-4Q9BYR9 128 aa6.56□□□□□ -1.36
SBF1-205ENST00000470434 KRTAP2-1Q9BYU5 128 aa6.56□□□□□ -1.36
SBF1-205ENST00000470434 KRTAP5-9P26371 169 aa6.53□□□□□ -1.36
SBF1-205ENST00000470434 MT1LQ93083 61 aa6.53□□□□□ -1.36
SBF1-205ENST00000470434 MT1EP04732 61 aa6.52□□□□□ -1.37
SBF1-205ENST00000470434 SPRR2FQ96RM1 72 aa6.49□□□□□ -1.37
SBF1-205ENST00000470434 SPRR2EP22531 72 aa6.25□□□□□ -1.41
SBF1-205ENST00000470434 SPRR2BP35325 72 aa6.25□□□□□ -1.41
SBF1-205ENST00000470434 SPRR2AP35326 72 aa6.25□□□□□ -1.41
SBF1-205ENST00000470434 MUC12Q9UKN1 5478 aa6.24□□□□□ -1.41
SBF1-205ENST00000470434 LCE1AQ5T7P2 110 aa6.24□□□□□ -1.41
SBF1-205ENST00000470434 KRTAP19-3Q7Z4W3 81 aa6.19□□□□□ -1.42
SBF1-205ENST00000470434 MDN1Q9NU22 5596 aa6.15□□□□□ -1.43
SBF1-205ENST00000470434 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
SBF1-205ENST00000470434 KRTAP4-3Q9BYR4 195 aa6.14□□□□□ -1.43
SBF1-205ENST00000470434 LCE5AQ5TCM9 118 aa6.12□□□□□ -1.43
SBF1-205ENST00000470434 NEBP20929 6669 aa6.12□□□□□ -1.43
SBF1-205ENST00000470434 MT1GP13640 62 aa6.11□□□□□ -1.43
SBF1-205ENST00000470434 MT1MQ8N339 61 aa6.08□□□□□ -1.44
SBF1-205ENST00000470434 SPRR2DP22532 72 aa6.03□□□□□ -1.44
SBF1-205ENST00000470434 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
SBF1-205ENST00000470434 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
SBF1-205ENST00000470434 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
SBF1-205ENST00000470434 DSTQ03001 7570 aaKnown RBP5.73□□□□□ -1.49
SBF1-205ENST00000470434 KRTAP2-2Q9BYT5 123 aa5.69□□□□□ -1.5
SBF1-205ENST00000470434 MT1AP04731 61 aa5.57□□□□□ -1.52
SBF1-205ENST00000470434 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
SBF1-205ENST00000470434 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
SBF1-205ENST00000470434 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
SBF1-205ENST00000470434 SYNE1Q8NF91 8797 aaKnown RBP5.4□□□□□ -1.55
SBF1-205ENST00000470434 LCE3DQ9BYE3 92 aa5.39□□□□□ -1.55
SBF1-205ENST00000470434 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
SBF1-205ENST00000470434 KRTAP5-4Q6L8H1 288 aa5.38□□□□□ -1.55
SBF1-205ENST00000470434 LCE3EQ5T5B0 92 aa5.33□□□□□ -1.56
SBF1-205ENST00000470434 MT4P47944 62 aa5.22□□□□□ -1.57
SBF1-205ENST00000470434 LCE1DQ5T752 114 aa5.2□□□□□ -1.58
SBF1-205ENST00000470434 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
SBF1-205ENST00000470434 PRM1P04553 51 aa5.14□□□□□ -1.59
SBF1-205ENST00000470434 KRTAP4-6Q9BYQ5 205 aa5.13□□□□□ -1.59
SBF1-205ENST00000470434 KRTAP20-2Q3LI61 65 aa5.03□□□□□ -1.6
SBF1-205ENST00000470434 HMCN1Q96RW7 5635 aa5.03□□□□□ -1.6
SBF1-205ENST00000470434 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
SBF1-205ENST00000470434 MT3P25713 68 aa4.92□□□□□ -1.62
SBF1-205ENST00000470434 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
SBF1-205ENST00000470434 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
SBF1-205ENST00000470434 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
SBF1-205ENST00000470434 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.67
SBF1-205ENST00000470434 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
SBF1-205ENST00000470434 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
SBF1-205ENST00000470434 GPR98Q8WXG9 6306 aa4.45□□□□□ -1.7
SBF1-205ENST00000470434 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
SBF1-205ENST00000470434 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
SBF1-205ENST00000470434 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
SBF1-205ENST00000470434 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
SBF1-205ENST00000470434 MUC5ACP98088 5654 aa4.18□□□□□ -1.74
SBF1-205ENST00000470434 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
SBF1-205ENST00000470434 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
SBF1-205ENST00000470434 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
SBF1-205ENST00000470434 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
SBF1-205ENST00000470434 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
SBF1-205ENST00000470434 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
SBF1-205ENST00000470434 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
SBF1-205ENST00000470434 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
SBF1-205ENST00000470434 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
SBF1-205ENST00000470434 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
SBF1-205ENST00000470434 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SBF1-205ENST00000470434 KRTAP21-1Q3LI58 79 aa3.27□□□□□ -1.89
SBF1-205ENST00000470434 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
SBF1-205ENST00000470434 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
SBF1-205ENST00000470434 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
SBF1-205ENST00000470434 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 440.6 ms