RNA–Protein interactions for RNA: ENST00000470271.5

CTPS1-206, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-206ENST00000470271 K7ERS5 55 aa7.11□□□□□ -1.27
CTPS1-206ENST00000470271 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
CTPS1-206ENST00000470271 MT1LQ93083 61 aa7.09□□□□□ -1.27
CTPS1-206ENST00000470271 MT1MQ8N339 61 aa7.03□□□□□ -1.28
CTPS1-206ENST00000470271 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
CTPS1-206ENST00000470271 A6NED7 52 aa6.97□□□□□ -1.29
CTPS1-206ENST00000470271 PCP4P48539 62 aa6.97□□□□□ -1.29
CTPS1-206ENST00000470271 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
CTPS1-206ENST00000470271 RPS28P62857 69 aaKnown RBP6.95□□□□□ -1.3
CTPS1-206ENST00000470271 KRTAP4-3Q9BYR4 195 aa6.85□□□□□ -1.31
CTPS1-206ENST00000470271 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
CTPS1-206ENST00000470271 KRTAP4-7Q9BYR0 210 aa6.75□□□□□ -1.33
CTPS1-206ENST00000470271 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
CTPS1-206ENST00000470271 CDC42SE1Q9NRR8 79 aa6.74□□□□□ -1.33
CTPS1-206ENST00000470271 LCE4AQ5TA78 99 aa6.71□□□□□ -1.34
CTPS1-206ENST00000470271 LCE1DQ5T752 114 aa6.67□□□□□ -1.34
CTPS1-206ENST00000470271 ROMO1P60602 79 aa6.64□□□□□ -1.35
CTPS1-206ENST00000470271 MT4P47944 62 aa6.62□□□□□ -1.35
CTPS1-206ENST00000470271 KRTAP5-4Q6L8H1 288 aa6.61□□□□□ -1.35
CTPS1-206ENST00000470271 HMCN1Q96RW7 5635 aa6.6□□□□□ -1.35
CTPS1-206ENST00000470271 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.35
CTPS1-206ENST00000470271 GPR98Q8WXG9 6306 aa6.58□□□□□ -1.36
CTPS1-206ENST00000470271 KRTAP15-1Q3LI76 137 aa6.56□□□□□ -1.36
CTPS1-206ENST00000470271 KRTAP4-6Q9BYQ5 205 aa6.44□□□□□ -1.38
CTPS1-206ENST00000470271 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
CTPS1-206ENST00000470271 KRTAP5-5Q701N2 237 aaPredicted RBP6.43□□□□□ -1.38
CTPS1-206ENST00000470271 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
CTPS1-206ENST00000470271 AHNAK2Q8IVF2 5795 aa6.31□□□□□ -1.4
CTPS1-206ENST00000470271 KRTAP12-4P60329 112 aa6.24□□□□□ -1.41
CTPS1-206ENST00000470271 KRTAP20-2Q3LI61 65 aa6.23□□□□□ -1.41
CTPS1-206ENST00000470271 SYNE1Q8NF91 8797 aaKnown RBP6.22□□□□□ -1.41
CTPS1-206ENST00000470271 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
CTPS1-206ENST00000470271 BRK1Q8WUW1 75 aa6.12□□□□□ -1.43
CTPS1-206ENST00000470271 KRTAP5-10Q6L8G5 202 aa6.11□□□□□ -1.43
CTPS1-206ENST00000470271 KRTAP9-6A8MVA2 160 aa6.05□□□□□ -1.44
CTPS1-206ENST00000470271 MT1AP04731 61 aa6.04□□□□□ -1.44
CTPS1-206ENST00000470271 KRTAP5-3Q6L8H2 238 aa6.04□□□□□ -1.44
CTPS1-206ENST00000470271 KRTAP6-1Q3LI64 71 aa5.99□□□□□ -1.45
CTPS1-206ENST00000470271 KRTAP5-7Q6L8G8 165 aa5.85□□□□□ -1.47
CTPS1-206ENST00000470271 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
CTPS1-206ENST00000470271 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
CTPS1-206ENST00000470271 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
CTPS1-206ENST00000470271 KRTAP6-2Q3LI66 62 aa5.7□□□□□ -1.5
CTPS1-206ENST00000470271 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
CTPS1-206ENST00000470271 MT3P25713 68 aa5.53□□□□□ -1.52
CTPS1-206ENST00000470271 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
CTPS1-206ENST00000470271 OBSCNQ5VST9 7968 aa5.5□□□□□ -1.53
CTPS1-206ENST00000470271 KRTAP5-8O75690 187 aa5.45□□□□□ -1.54
CTPS1-206ENST00000470271 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
CTPS1-206ENST00000470271 KRTAP5-1Q6L8H4 278 aa5.19□□□□□ -1.58
CTPS1-206ENST00000470271 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
CTPS1-206ENST00000470271 MUC5BQ9HC84 5762 aaPredicted RBP5.16□□□□□ -1.58
CTPS1-206ENST00000470271 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
CTPS1-206ENST00000470271 AHNAKQ09666 5890 aaKnown RBP5.13□□□□□ -1.59
CTPS1-206ENST00000470271 MUC5ACP98088 5654 aa5.13□□□□□ -1.59
CTPS1-206ENST00000470271 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
CTPS1-206ENST00000470271 SVIPQ8NHG7 77 aa4.96□□□□□ -1.62
CTPS1-206ENST00000470271 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
CTPS1-206ENST00000470271 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
CTPS1-206ENST00000470271 LUZP6Q538Z0 58 aa4.67□□□□□ -1.66
CTPS1-206ENST00000470271 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
CTPS1-206ENST00000470271 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
CTPS1-206ENST00000470271 KRTAP4-12Q9BQ66 201 aa4.65□□□□□ -1.67
CTPS1-206ENST00000470271 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
CTPS1-206ENST00000470271 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.27□□□□□ -1.73
CTPS1-206ENST00000470271 KRTAP5-11Q6L8G4 156 aa4.21□□□□□ -1.74
CTPS1-206ENST00000470271 H3BS24 57 aa4.09□□□□□ -1.75
CTPS1-206ENST00000470271 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
CTPS1-206ENST00000470271 KRTAP21-2Q3LI59 83 aa3.94□□□□□ -1.78
CTPS1-206ENST00000470271 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
CTPS1-206ENST00000470271 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
CTPS1-206ENST00000470271 KRTAP4-4Q9BYR3 166 aa3.59□□□□□ -1.83
CTPS1-206ENST00000470271 PRM1P04553 51 aa3.4□□□□□ -1.87
CTPS1-206ENST00000470271 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
CTPS1-206ENST00000470271 INE1O15225 51 aa3.08□□□□□ -1.92
CTPS1-206ENST00000470271 A0A0A0MQY5 61 aa3.05□□□□□ -1.92
CTPS1-206ENST00000470271 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
CTPS1-206ENST00000470271 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 262.3 ms