RNA–Protein interactions for RNA: ENST00000470238.1

SCYL3-205, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 1,538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-205ENST00000470238 MT1GP13640 62 aa5.08□□□□□ -1.6
SCYL3-205ENST00000470238 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
SCYL3-205ENST00000470238 KRTAP9-6A0A140TA67 174 aa5.06□□□□□ -1.6
SCYL3-205ENST00000470238 KRTAP5-9P26371 169 aa5.05□□□□□ -1.6
SCYL3-205ENST00000470238 MT1MQ8N339 61 aa5.02□□□□□ -1.61
SCYL3-205ENST00000470238 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
SCYL3-205ENST00000470238 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
SCYL3-205ENST00000470238 KRTAP4-6Q9BYQ5 205 aa5□□□□□ -1.61
SCYL3-205ENST00000470238 MUC12Q9UKN1 5478 aa4.99□□□□□ -1.61
SCYL3-205ENST00000470238 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.97□□□□□ -1.61
SCYL3-205ENST00000470238 KRTAP9-6A8MVA2 160 aa4.96□□□□□ -1.62
SCYL3-205ENST00000470238 SYNE2Q8WXH0 6885 aaKnown RBP4.93□□□□□ -1.62
SCYL3-205ENST00000470238 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
SCYL3-205ENST00000470238 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
SCYL3-205ENST00000470238 LCE1AQ5T7P2 110 aa4.9□□□□□ -1.63
SCYL3-205ENST00000470238 SPRR2EP22531 72 aa4.87□□□□□ -1.63
SCYL3-205ENST00000470238 SPRR2BP35325 72 aa4.87□□□□□ -1.63
SCYL3-205ENST00000470238 SPRR2AP35326 72 aa4.87□□□□□ -1.63
SCYL3-205ENST00000470238 H3BS24 57 aa4.82□□□□□ -1.64
SCYL3-205ENST00000470238 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
SCYL3-205ENST00000470238 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
SCYL3-205ENST00000470238 SPRR2DP22532 72 aa4.68□□□□□ -1.66
SCYL3-205ENST00000470238 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
SCYL3-205ENST00000470238 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
SCYL3-205ENST00000470238 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
SCYL3-205ENST00000470238 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.67
SCYL3-205ENST00000470238 DSTQ03001 7570 aaKnown RBP4.58□□□□□ -1.68
SCYL3-205ENST00000470238 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
SCYL3-205ENST00000470238 LCE3BQ5TA77 95 aa4.48□□□□□ -1.69
SCYL3-205ENST00000470238 MT1AP04731 61 aa4.46□□□□□ -1.69
SCYL3-205ENST00000470238 NEBP20929 6669 aa4.46□□□□□ -1.69
SCYL3-205ENST00000470238 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
SCYL3-205ENST00000470238 INE1O15225 51 aa4.36□□□□□ -1.71
SCYL3-205ENST00000470238 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
SCYL3-205ENST00000470238 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
SCYL3-205ENST00000470238 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
SCYL3-205ENST00000470238 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
SCYL3-205ENST00000470238 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
SCYL3-205ENST00000470238 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
SCYL3-205ENST00000470238 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
SCYL3-205ENST00000470238 KRTAP20-1Q3LI63 56 aa4.16□□□□□ -1.74
SCYL3-205ENST00000470238 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
SCYL3-205ENST00000470238 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
SCYL3-205ENST00000470238 MT4P47944 62 aa4.05□□□□□ -1.76
SCYL3-205ENST00000470238 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
SCYL3-205ENST00000470238 MT3P25713 68 aa4.05□□□□□ -1.76
SCYL3-205ENST00000470238 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
SCYL3-205ENST00000470238 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
SCYL3-205ENST00000470238 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
SCYL3-205ENST00000470238 LCE1DQ5T752 114 aa3.96□□□□□ -1.78
SCYL3-205ENST00000470238 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
SCYL3-205ENST00000470238 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
SCYL3-205ENST00000470238 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
SCYL3-205ENST00000470238 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
SCYL3-205ENST00000470238 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
SCYL3-205ENST00000470238 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.84
SCYL3-205ENST00000470238 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
SCYL3-205ENST00000470238 PRM1P04553 51 aa3.44□□□□□ -1.86
SCYL3-205ENST00000470238 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.87
SCYL3-205ENST00000470238 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
SCYL3-205ENST00000470238 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
SCYL3-205ENST00000470238 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
SCYL3-205ENST00000470238 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
SCYL3-205ENST00000470238 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
SCYL3-205ENST00000470238 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
SCYL3-205ENST00000470238 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
SCYL3-205ENST00000470238 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
SCYL3-205ENST00000470238 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.94
SCYL3-205ENST00000470238 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
SCYL3-205ENST00000470238 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
SCYL3-205ENST00000470238 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
SCYL3-205ENST00000470238 LCE1FQ5T754 118 aa2.55□□□□□ -2
SCYL3-205ENST00000470238 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
SCYL3-205ENST00000470238 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
SCYL3-205ENST00000470238 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
SCYL3-205ENST00000470238 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SCYL3-205ENST00000470238 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
SCYL3-205ENST00000470238 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 38.9 ms