RNA–Protein interactions for RNA: ENST00000469956.1

LCK-209, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 2

Gene LCK, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-209ENST00000469956 KRTAP4-3Q9BYR4 195 aa6.1□□□□□ -1.43
LCK-209ENST00000469956 UQCR11O14957 56 aa6.09□□□□□ -1.43
LCK-209ENST00000469956 RPS28P62857 69 aaKnown RBP6.07□□□□□ -1.44
LCK-209ENST00000469956 GPR98Q8WXG9 6306 aa6.04□□□□□ -1.44
LCK-209ENST00000469956 LCE1DQ5T752 114 aa6.03□□□□□ -1.44
LCK-209ENST00000469956 V9GYY9 64 aa6□□□□□ -1.45
LCK-209ENST00000469956 KRTAP12-3P60328 96 aa5.99□□□□□ -1.45
LCK-209ENST00000469956 MT4P47944 62 aa5.98□□□□□ -1.45
LCK-209ENST00000469956 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
LCK-209ENST00000469956 Q1T7F1 81 aa5.97□□□□□ -1.45
LCK-209ENST00000469956 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
LCK-209ENST00000469956 KRTAP4-7Q9BYR0 210 aa5.96□□□□□ -1.46
LCK-209ENST00000469956 HMCN1Q96RW7 5635 aa5.95□□□□□ -1.46
LCK-209ENST00000469956 PSPHP1O15172 72 aa5.89□□□□□ -1.47
LCK-209ENST00000469956 KRTAP5-4Q6L8H1 288 aa5.88□□□□□ -1.47
LCK-209ENST00000469956 KRTAP25-1Q3LHN0 102 aa5.86□□□□□ -1.47
LCK-209ENST00000469956 K7ERS5 55 aa5.82□□□□□ -1.48
LCK-209ENST00000469956 KRTAP4-6Q9BYQ5 205 aa5.81□□□□□ -1.48
LCK-209ENST00000469956 AHNAK2Q8IVF2 5795 aa5.77□□□□□ -1.49
LCK-209ENST00000469956 A6NED7 52 aa5.7□□□□□ -1.5
LCK-209ENST00000469956 KRTAP5-5Q701N2 237 aaPredicted RBP5.67□□□□□ -1.5
LCK-209ENST00000469956 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
LCK-209ENST00000469956 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
LCK-209ENST00000469956 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
LCK-209ENST00000469956 KRTAP5-10Q6L8G5 202 aa5.58□□□□□ -1.52
LCK-209ENST00000469956 KRTAP20-2Q3LI61 65 aa5.57□□□□□ -1.52
LCK-209ENST00000469956 CDC42SE1Q9NRR8 79 aa5.57□□□□□ -1.52
LCK-209ENST00000469956 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
LCK-209ENST00000469956 SYNE1Q8NF91 8797 aaKnown RBP5.52□□□□□ -1.53
LCK-209ENST00000469956 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
LCK-209ENST00000469956 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
LCK-209ENST00000469956 KRTAP12-4P60329 112 aa5.48□□□□□ -1.53
LCK-209ENST00000469956 ROMO1P60602 79 aa5.46□□□□□ -1.54
LCK-209ENST00000469956 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
LCK-209ENST00000469956 BRK1Q8WUW1 75 aa5.4□□□□□ -1.54
LCK-209ENST00000469956 H3BS24 57 aa5.36□□□□□ -1.55
LCK-209ENST00000469956 KRTAP5-7Q6L8G8 165 aa5.35□□□□□ -1.55
LCK-209ENST00000469956 MT1AP04731 61 aa5.27□□□□□ -1.57
LCK-209ENST00000469956 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
LCK-209ENST00000469956 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
LCK-209ENST00000469956 KRTAP5-2Q701N4 177 aa5.16□□□□□ -1.58
LCK-209ENST00000469956 PRO0628Q9UI54 55 aa5.13□□□□□ -1.59
LCK-209ENST00000469956 PMAIP1Q13794 54 aa5.09□□□□□ -1.59
LCK-209ENST00000469956 KRTAP9-4Q9BYQ2 154 aa5.09□□□□□ -1.59
LCK-209ENST00000469956 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
LCK-209ENST00000469956 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
LCK-209ENST00000469956 SVIPQ8NHG7 77 aa4.92□□□□□ -1.62
LCK-209ENST00000469956 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
LCK-209ENST00000469956 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
LCK-209ENST00000469956 MT3P25713 68 aa4.8□□□□□ -1.64
LCK-209ENST00000469956 KTN1-AS1Q86SY8 53 aa4.8□□□□□ -1.64
LCK-209ENST00000469956 PRAC1Q96KF2 57 aa4.8□□□□□ -1.64
LCK-209ENST00000469956 AHNAKQ09666 5890 aaKnown RBP4.74□□□□□ -1.65
LCK-209ENST00000469956 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
LCK-209ENST00000469956 MUC5BQ9HC84 5762 aaPredicted RBP4.72□□□□□ -1.65
LCK-209ENST00000469956 KRTAP5-1Q6L8H4 278 aa4.63□□□□□ -1.67
LCK-209ENST00000469956 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
LCK-209ENST00000469956 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
LCK-209ENST00000469956 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
LCK-209ENST00000469956 KRTAP4-2Q9BYR5 136 aa4.2□□□□□ -1.74
LCK-209ENST00000469956 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
LCK-209ENST00000469956 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
LCK-209ENST00000469956 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
LCK-209ENST00000469956 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
LCK-209ENST00000469956 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
LCK-209ENST00000469956 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
LCK-209ENST00000469956 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
LCK-209ENST00000469956 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
LCK-209ENST00000469956 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
LCK-209ENST00000469956 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
LCK-209ENST00000469956 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
LCK-209ENST00000469956 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
LCK-209ENST00000469956 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
LCK-209ENST00000469956 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
LCK-209ENST00000469956 INE1O15225 51 aa3.03□□□□□ -1.92
LCK-209ENST00000469956 PRM1P04553 51 aa2.82□□□□□ -1.96
LCK-209ENST00000469956 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
LCK-209ENST00000469956 MUC16Q8WXI7 14507 aa2.13□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 55.6 ms