RNA–Protein interactions for RNA: ENST00000469602.1

SRRT-208, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 376 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-208ENST00000469602 K7ERS5 55 aa3.49□□□□□ -1.85
SRRT-208ENST00000469602 MT1GP13640 62 aa3.49□□□□□ -1.85
SRRT-208ENST00000469602 PCP4P48539 62 aa3.47□□□□□ -1.85
SRRT-208ENST00000469602 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
SRRT-208ENST00000469602 MT1LQ93083 61 aa3.47□□□□□ -1.85
SRRT-208ENST00000469602 RPS28P62857 69 aaKnown RBP3.45□□□□□ -1.86
SRRT-208ENST00000469602 A6NED7 52 aa3.44□□□□□ -1.86
SRRT-208ENST00000469602 KRTAP25-1Q3LHN0 102 aa3.44□□□□□ -1.86
SRRT-208ENST00000469602 MT1MQ8N339 61 aa3.44□□□□□ -1.86
SRRT-208ENST00000469602 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
SRRT-208ENST00000469602 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
SRRT-208ENST00000469602 KRTAP23-1A1A580 65 aa3.32□□□□□ -1.88
SRRT-208ENST00000469602 CDC42SE1Q9NRR8 79 aa3.31□□□□□ -1.88
SRRT-208ENST00000469602 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
SRRT-208ENST00000469602 KRTAP4-7Q9BYR0 210 aa3.3□□□□□ -1.88
SRRT-208ENST00000469602 SVIPQ8NHG7 77 aa3.29□□□□□ -1.88
SRRT-208ENST00000469602 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
SRRT-208ENST00000469602 HMCN1Q96RW7 5635 aa3.28□□□□□ -1.88
SRRT-208ENST00000469602 ROMO1P60602 79 aa3.27□□□□□ -1.89
SRRT-208ENST00000469602 LCE4AQ5TA78 99 aa3.26□□□□□ -1.89
SRRT-208ENST00000469602 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
SRRT-208ENST00000469602 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
SRRT-208ENST00000469602 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
SRRT-208ENST00000469602 MT4P47944 62 aa3.22□□□□□ -1.89
SRRT-208ENST00000469602 KRTAP15-1Q3LI76 137 aa3.22□□□□□ -1.89
SRRT-208ENST00000469602 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
SRRT-208ENST00000469602 KRTAP5-5Q701N2 237 aaPredicted RBP3.15□□□□□ -1.91
SRRT-208ENST00000469602 KRTAP4-6Q9BYQ5 205 aa3.14□□□□□ -1.91
SRRT-208ENST00000469602 LOC100996750A0A140TA64 210 aa3.12□□□□□ -1.91
SRRT-208ENST00000469602 AHNAK2Q8IVF2 5795 aa3.11□□□□□ -1.91
SRRT-208ENST00000469602 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
SRRT-208ENST00000469602 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
SRRT-208ENST00000469602 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
SRRT-208ENST00000469602 BRK1Q8WUW1 75 aa3.03□□□□□ -1.92
SRRT-208ENST00000469602 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
SRRT-208ENST00000469602 KRTAP9-6A8MVA2 160 aa2.97□□□□□ -1.93
SRRT-208ENST00000469602 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
SRRT-208ENST00000469602 KRTAP4-12Q9BQ66 201 aa2.97□□□□□ -1.93
SRRT-208ENST00000469602 MT1AP04731 61 aa2.95□□□□□ -1.94
SRRT-208ENST00000469602 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
SRRT-208ENST00000469602 KRTAP6-1Q3LI64 71 aa2.93□□□□□ -1.94
SRRT-208ENST00000469602 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
SRRT-208ENST00000469602 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
SRRT-208ENST00000469602 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
SRRT-208ENST00000469602 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
SRRT-208ENST00000469602 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
SRRT-208ENST00000469602 KRTAP4-11Q9BYQ6 195 aa2.76□□□□□ -1.97
SRRT-208ENST00000469602 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
SRRT-208ENST00000469602 PRAC1Q96KF2 57 aa2.73□□□□□ -1.97
SRRT-208ENST00000469602 MT3P25713 68 aa2.7□□□□□ -1.98
SRRT-208ENST00000469602 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
SRRT-208ENST00000469602 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
SRRT-208ENST00000469602 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
SRRT-208ENST00000469602 KRTAP5-8O75690 187 aa2.65□□□□□ -1.99
SRRT-208ENST00000469602 MUC5BQ9HC84 5762 aaPredicted RBP2.59□□□□□ -2
SRRT-208ENST00000469602 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
SRRT-208ENST00000469602 KTN1-AS1Q86SY8 53 aa2.57□□□□□ -2
SRRT-208ENST00000469602 MUC5ACP98088 5654 aa2.57□□□□□ -2
SRRT-208ENST00000469602 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
SRRT-208ENST00000469602 LCE1EQ5T753 118 aa2.46□□□□□ -2.02
SRRT-208ENST00000469602 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
SRRT-208ENST00000469602 LUZP6Q538Z0 58 aa2.3□□□□□ -2.04
SRRT-208ENST00000469602 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
SRRT-208ENST00000469602 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
SRRT-208ENST00000469602 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
SRRT-208ENST00000469602 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
SRRT-208ENST00000469602 NDUFAF8A1L188 74 aa2.14□□□□□ -2.07
SRRT-208ENST00000469602 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
SRRT-208ENST00000469602 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
SRRT-208ENST00000469602 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
SRRT-208ENST00000469602 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
SRRT-208ENST00000469602 PHGR1C9JFL3 82 aa1.78□□□□□ -2.12
SRRT-208ENST00000469602 KRTAP4-4Q9BYR3 166 aa1.75□□□□□ -2.13
SRRT-208ENST00000469602 PRM1P04553 51 aa1.67□□□□□ -2.14
SRRT-208ENST00000469602 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
SRRT-208ENST00000469602 INE1O15225 51 aa1.54□□□□□ -2.16
SRRT-208ENST00000469602 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
SRRT-208ENST00000469602 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 73.7 ms