RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.22
RTN4R-205ENST00000469601 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
RTN4R-205ENST00000469601 LCE4AQ5TA78 99 aa7.36□□□□□ -1.23
RTN4R-205ENST00000469601 K7ERS5 55 aa7.35□□□□□ -1.23
RTN4R-205ENST00000469601 V9GYY9 64 aa7.34□□□□□ -1.23
RTN4R-205ENST00000469601 KRTAP25-1Q3LHN0 102 aa7.31□□□□□ -1.24
RTN4R-205ENST00000469601 LCE1DQ5T752 114 aa7.31□□□□□ -1.24
RTN4R-205ENST00000469601 KRTAP4-3Q9BYR4 195 aa7.3□□□□□ -1.24
RTN4R-205ENST00000469601 MT4P47944 62 aa7.23□□□□□ -1.25
RTN4R-205ENST00000469601 PSPHP1O15172 72 aa7.22□□□□□ -1.25
RTN4R-205ENST00000469601 Q1T7F1 81 aa7.22□□□□□ -1.25
RTN4R-205ENST00000469601 KRTAP5-4Q6L8H1 288 aa7.19□□□□□ -1.26
RTN4R-205ENST00000469601 KRTAP4-7Q9BYR0 210 aa7.14□□□□□ -1.27
RTN4R-205ENST00000469601 GPR98Q8WXG9 6306 aa7.08□□□□□ -1.28
RTN4R-205ENST00000469601 HMCN1Q96RW7 5635 aa7.05□□□□□ -1.28
RTN4R-205ENST00000469601 KRTAP23-1A1A580 65 aa7.05□□□□□ -1.28
RTN4R-205ENST00000469601 KRTAP19-4Q3LI73 84 aa7.05□□□□□ -1.28
RTN4R-205ENST00000469601 A6NED7 52 aa7.02□□□□□ -1.29
RTN4R-205ENST00000469601 KRTAP4-6Q9BYQ5 205 aa7□□□□□ -1.29
RTN4R-205ENST00000469601 CDC42SE1Q9NRR8 79 aa6.91□□□□□ -1.3
RTN4R-205ENST00000469601 KRTAP5-5Q701N2 237 aaPredicted RBP6.9□□□□□ -1.3
RTN4R-205ENST00000469601 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
RTN4R-205ENST00000469601 RPS28P62857 69 aaKnown RBP6.84□□□□□ -1.31
RTN4R-205ENST00000469601 KRTAP12-4P60329 112 aa6.81□□□□□ -1.32
RTN4R-205ENST00000469601 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
RTN4R-205ENST00000469601 KRTAP5-10Q6L8G5 202 aa6.79□□□□□ -1.32
RTN4R-205ENST00000469601 KRTAP20-2Q3LI61 65 aa6.78□□□□□ -1.32
RTN4R-205ENST00000469601 LCE3CQ5T5A8 94 aa6.78□□□□□ -1.32
RTN4R-205ENST00000469601 LOC100996750A0A140TA64 210 aa6.77□□□□□ -1.33
RTN4R-205ENST00000469601 ROMO1P60602 79 aa6.77□□□□□ -1.33
RTN4R-205ENST00000469601 AHNAK2Q8IVF2 5795 aa6.7□□□□□ -1.34
RTN4R-205ENST00000469601 PCP4P48539 62 aa6.65□□□□□ -1.34
RTN4R-205ENST00000469601 KRTAP5-3Q6L8H2 238 aa6.64□□□□□ -1.35
RTN4R-205ENST00000469601 KRTAP5-7Q6L8G8 165 aa6.55□□□□□ -1.36
RTN4R-205ENST00000469601 MT1AP04731 61 aa6.45□□□□□ -1.38
RTN4R-205ENST00000469601 SYNE1Q8NF91 8797 aaKnown RBP6.39□□□□□ -1.39
RTN4R-205ENST00000469601 KRTAP6-1Q3LI64 71 aa6.38□□□□□ -1.39
RTN4R-205ENST00000469601 KRTAP9-6A8MVA2 160 aa6.31□□□□□ -1.4
RTN4R-205ENST00000469601 KRTAP5-2Q701N4 177 aa6.3□□□□□ -1.4
RTN4R-205ENST00000469601 KRTAP9-4Q9BYQ2 154 aa6.25□□□□□ -1.41
RTN4R-205ENST00000469601 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
RTN4R-205ENST00000469601 KRTAP6-2Q3LI66 62 aa6.12□□□□□ -1.43
RTN4R-205ENST00000469601 KRTAP5-8O75690 187 aa5.97□□□□□ -1.45
RTN4R-205ENST00000469601 BRK1Q8WUW1 75 aa5.97□□□□□ -1.45
RTN4R-205ENST00000469601 MT3P25713 68 aa5.94□□□□□ -1.46
RTN4R-205ENST00000469601 KRTAP9-9Q9BYP9 154 aa5.72□□□□□ -1.49
RTN4R-205ENST00000469601 OBSCNQ5VST9 7968 aa5.72□□□□□ -1.49
RTN4R-205ENST00000469601 KRTAP5-1Q6L8H4 278 aa5.64□□□□□ -1.51
RTN4R-205ENST00000469601 PMAIP1Q13794 54 aa5.63□□□□□ -1.51
RTN4R-205ENST00000469601 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
RTN4R-205ENST00000469601 MUC5BQ9HC84 5762 aaPredicted RBP5.53□□□□□ -1.52
RTN4R-205ENST00000469601 AHNAKQ09666 5890 aaKnown RBP5.49□□□□□ -1.53
RTN4R-205ENST00000469601 LCE1EQ5T753 118 aa5.47□□□□□ -1.53
RTN4R-205ENST00000469601 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
RTN4R-205ENST00000469601 PRO0628Q9UI54 55 aa5.15□□□□□ -1.59
RTN4R-205ENST00000469601 LCE1BQ5T7P3 118 aa5.1□□□□□ -1.59
RTN4R-205ENST00000469601 KRTAP4-2Q9BYR5 136 aa5.1□□□□□ -1.59
RTN4R-205ENST00000469601 LCE1CQ5T751 118 aa5.06□□□□□ -1.6
RTN4R-205ENST00000469601 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
RTN4R-205ENST00000469601 LCE3DQ9BYE3 92 aa4.9□□□□□ -1.63
RTN4R-205ENST00000469601 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
RTN4R-205ENST00000469601 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
RTN4R-205ENST00000469601 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
RTN4R-205ENST00000469601 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
RTN4R-205ENST00000469601 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
RTN4R-205ENST00000469601 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
RTN4R-205ENST00000469601 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
RTN4R-205ENST00000469601 KRTAP21-2Q3LI59 83 aa4.2□□□□□ -1.74
RTN4R-205ENST00000469601 PHGR1C9JFL3 82 aa3.97□□□□□ -1.77
RTN4R-205ENST00000469601 KRTAP4-4Q9BYR3 166 aa3.82□□□□□ -1.8
RTN4R-205ENST00000469601 NDUFAF8A1L188 74 aa3.62□□□□□ -1.83
RTN4R-205ENST00000469601 MUC19Q7Z5P9 8384 aa3.5□□□□□ -1.85
RTN4R-205ENST00000469601 PRM1P04553 51 aa3.43□□□□□ -1.86
RTN4R-205ENST00000469601 H3BS24 57 aa3.1□□□□□ -1.91
RTN4R-205ENST00000469601 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
RTN4R-205ENST00000469601 A0A0A0MQY5 61 aa2.92□□□□□ -1.94
RTN4R-205ENST00000469601 INE1O15225 51 aa2.92□□□□□ -1.94
RTN4R-205ENST00000469601 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 15.2 ms