RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 KRTAP19-8Q3LI54 63 aa2.25□□□□□ -2.05
ITGA6-208ENST00000469534 CDC42SE1Q9NRR8 79 aa2.25□□□□□ -2.05
ITGA6-208ENST00000469534 USH2AO75445 5202 aa2.24□□□□□ -2.05
ITGA6-208ENST00000469534 PLAC4Q8WY50 150 aa2.24□□□□□ -2.05
ITGA6-208ENST00000469534 LCE3AQ5TA76 89 aa2.23□□□□□ -2.05
ITGA6-208ENST00000469534 CAMK2N1Q7Z7J9 78 aa2.22□□□□□ -2.05
ITGA6-208ENST00000469534 PMAIP1Q13794 54 aa2.2□□□□□ -2.06
ITGA6-208ENST00000469534 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
ITGA6-208ENST00000469534 A6NN06 94 aa2.18□□□□□ -2.06
ITGA6-208ENST00000469534 K7ERS5 55 aa2.18□□□□□ -2.06
ITGA6-208ENST00000469534 SSPOA2VEC9 5147 aa2.17□□□□□ -2.06
ITGA6-208ENST00000469534 MT1XP80297 61 aa2.17□□□□□ -2.06
ITGA6-208ENST00000469534 C10orf95Q9H7T3 257 aa2.15□□□□□ -2.07
ITGA6-208ENST00000469534 FSIP2Q5CZC0 6907 aa2.15□□□□□ -2.07
ITGA6-208ENST00000469534 CRCT1Q9UGL9 99 aa2.14□□□□□ -2.07
ITGA6-208ENST00000469534 KRTAP19-6Q3LI70 58 aa2.13□□□□□ -2.07
ITGA6-208ENST00000469534 PRO2289Q9P1D8 64 aa2.11□□□□□ -2.07
ITGA6-208ENST00000469534 ROMO1P60602 79 aa2.1□□□□□ -2.07
ITGA6-208ENST00000469534 FCGBPQ9Y6R7 5405 aaPredicted RBP2.09□□□□□ -2.07
ITGA6-208ENST00000469534 TNP1P09430 55 aa2.07□□□□□ -2.08
ITGA6-208ENST00000469534 KRTAP5-5Q701N2 237 aaPredicted RBP2.05□□□□□ -2.08
ITGA6-208ENST00000469534 KTN1-AS1Q86SY8 53 aa2.04□□□□□ -2.08
ITGA6-208ENST00000469534 KMT2DO14686 5537 aa2.02□□□□□ -2.09
ITGA6-208ENST00000469534 KRTAP25-1Q3LHN0 102 aa2.02□□□□□ -2.09
ITGA6-208ENST00000469534 KRTAP8-1Q8IUC2 63 aa1.99□□□□□ -2.09
ITGA6-208ENST00000469534 KRTAP19-5Q3LI72 72 aa1.98□□□□□ -2.09
ITGA6-208ENST00000469534 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
ITGA6-208ENST00000469534 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
ITGA6-208ENST00000469534 MACF1Q9UPN3 7388 aaKnown RBP1.95□□□□□ -2.1
ITGA6-208ENST00000469534 SPRR2FQ96RM1 72 aa1.95□□□□□ -2.1
ITGA6-208ENST00000469534 SYNE2Q8WXH0 6885 aaKnown RBP1.94□□□□□ -2.1
ITGA6-208ENST00000469534 KRTAP19-7Q3SYF9 63 aa1.93□□□□□ -2.1
ITGA6-208ENST00000469534 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
ITGA6-208ENST00000469534 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
ITGA6-208ENST00000469534 MT1EP04732 61 aa1.9□□□□□ -2.11
ITGA6-208ENST00000469534 PP632Q6XCG6 107 aa1.9□□□□□ -2.11
ITGA6-208ENST00000469534 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
ITGA6-208ENST00000469534 SPRR2EP22531 72 aa1.88□□□□□ -2.11
ITGA6-208ENST00000469534 SPRR2BP35325 72 aa1.88□□□□□ -2.11
ITGA6-208ENST00000469534 SPRR2AP35326 72 aa1.88□□□□□ -2.11
ITGA6-208ENST00000469534 MUC12Q9UKN1 5478 aa1.88□□□□□ -2.11
ITGA6-208ENST00000469534 MT1LQ93083 61 aa1.86□□□□□ -2.11
ITGA6-208ENST00000469534 LUZP6Q538Z0 58 aa1.85□□□□□ -2.11
ITGA6-208ENST00000469534 KRTAP19-3Q7Z4W3 81 aa1.84□□□□□ -2.11
ITGA6-208ENST00000469534 MT1MQ8N339 61 aa1.81□□□□□ -2.12
ITGA6-208ENST00000469534 SPRR2DP22532 72 aa1.8□□□□□ -2.12
ITGA6-208ENST00000469534 MDN1Q9NU22 5596 aa1.79□□□□□ -2.12
ITGA6-208ENST00000469534 NEBP20929 6669 aa1.79□□□□□ -2.12
ITGA6-208ENST00000469534 MT1GP13640 62 aa1.78□□□□□ -2.12
ITGA6-208ENST00000469534 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
ITGA6-208ENST00000469534 KRTAP20-1Q3LI63 56 aa1.69□□□□□ -2.14
ITGA6-208ENST00000469534 SPRR5A0A1B0GTR4 108 aa1.67□□□□□ -2.14
ITGA6-208ENST00000469534 KRTAP2-3P0C7H8 128 aa1.67□□□□□ -2.14
ITGA6-208ENST00000469534 KRTAP2-4Q9BYR9 128 aa1.67□□□□□ -2.14
ITGA6-208ENST00000469534 DSTQ03001 7570 aaKnown RBP1.66□□□□□ -2.14
ITGA6-208ENST00000469534 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
ITGA6-208ENST00000469534 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
ITGA6-208ENST00000469534 MT4P47944 62 aa1.6□□□□□ -2.15
ITGA6-208ENST00000469534 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
ITGA6-208ENST00000469534 KRTAP6-1Q3LI64 71 aa1.59□□□□□ -2.15
ITGA6-208ENST00000469534 MT1AP04731 61 aa1.57□□□□□ -2.16
ITGA6-208ENST00000469534 SYNE1Q8NF91 8797 aaKnown RBP1.54□□□□□ -2.16
ITGA6-208ENST00000469534 INE1O15225 51 aa1.53□□□□□ -2.16
ITGA6-208ENST00000469534 GPR98Q8WXG9 6306 aa1.53□□□□□ -2.16
ITGA6-208ENST00000469534 KRTAP12-4P60329 112 aa1.51□□□□□ -2.17
ITGA6-208ENST00000469534 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
ITGA6-208ENST00000469534 KRTAP6-2Q3LI66 62 aa1.47□□□□□ -2.17
ITGA6-208ENST00000469534 HMCN1Q96RW7 5635 aa1.45□□□□□ -2.18
ITGA6-208ENST00000469534 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
ITGA6-208ENST00000469534 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
ITGA6-208ENST00000469534 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
ITGA6-208ENST00000469534 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
ITGA6-208ENST00000469534 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
ITGA6-208ENST00000469534 MUC5BQ9HC84 5762 aaPredicted RBP1.13□□□□□ -2.23
ITGA6-208ENST00000469534 PRM1P04553 51 aa1.13□□□□□ -2.23
ITGA6-208ENST00000469534 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
ITGA6-208ENST00000469534 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
ITGA6-208ENST00000469534 KRTAP21-1Q3LI58 79 aa0.63□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 64.4 ms