RNA–Protein interactions for RNA: ENST00000469491.5

FNDC3B-207, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 2

Gene FNDC3B, Length 2,916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-207ENST00000469491 SYNE2Q8WXH0 6885 aaKnown RBP5.95□□□□□ -1.46
FNDC3B-207ENST00000469491 KRTAP9-6A8MVA2 160 aa5.89□□□□□ -1.47
FNDC3B-207ENST00000469491 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
FNDC3B-207ENST00000469491 SPRR2FQ96RM1 72 aa5.87□□□□□ -1.47
FNDC3B-207ENST00000469491 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
FNDC3B-207ENST00000469491 KRTAP4-3Q9BYR4 195 aa5.83□□□□□ -1.48
FNDC3B-207ENST00000469491 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.49
FNDC3B-207ENST00000469491 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
FNDC3B-207ENST00000469491 MT1MQ8N339 61 aa5.71□□□□□ -1.5
FNDC3B-207ENST00000469491 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
FNDC3B-207ENST00000469491 MT1GP13640 62 aa5.69□□□□□ -1.5
FNDC3B-207ENST00000469491 KRTAP19-4Q3LI73 84 aa5.67□□□□□ -1.5
FNDC3B-207ENST00000469491 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
FNDC3B-207ENST00000469491 KRTAP5-9P26371 169 aa5.52□□□□□ -1.53
FNDC3B-207ENST00000469491 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
FNDC3B-207ENST00000469491 SPRR2EP22531 72 aa5.44□□□□□ -1.54
FNDC3B-207ENST00000469491 SPRR2BP35325 72 aa5.44□□□□□ -1.54
FNDC3B-207ENST00000469491 SPRR2AP35326 72 aa5.44□□□□□ -1.54
FNDC3B-207ENST00000469491 KRTAP9-6A0A140TA67 174 aa5.44□□□□□ -1.54
FNDC3B-207ENST00000469491 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
FNDC3B-207ENST00000469491 KRTAP2-3P0C7H8 128 aa5.39□□□□□ -1.55
FNDC3B-207ENST00000469491 KRTAP2-4Q9BYR9 128 aa5.39□□□□□ -1.55
FNDC3B-207ENST00000469491 KRTAP2-1Q9BYU5 128 aa5.39□□□□□ -1.55
FNDC3B-207ENST00000469491 KRTAP6-3Q3LI67 103 aa5.27□□□□□ -1.57
FNDC3B-207ENST00000469491 SYNE1Q8NF91 8797 aaKnown RBP5.26□□□□□ -1.57
FNDC3B-207ENST00000469491 SPRR2DP22532 72 aa5.21□□□□□ -1.57
FNDC3B-207ENST00000469491 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
FNDC3B-207ENST00000469491 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
FNDC3B-207ENST00000469491 INE1O15225 51 aa5.08□□□□□ -1.6
FNDC3B-207ENST00000469491 KRTAP5-5Q701N2 237 aaPredicted RBP5.06□□□□□ -1.6
FNDC3B-207ENST00000469491 KRTAP9-7A8MTY7 169 aa5.06□□□□□ -1.6
FNDC3B-207ENST00000469491 MT1AP04731 61 aa5.02□□□□□ -1.61
FNDC3B-207ENST00000469491 NEBP20929 6669 aa4.98□□□□□ -1.61
FNDC3B-207ENST00000469491 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
FNDC3B-207ENST00000469491 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
FNDC3B-207ENST00000469491 KRTAP9-4Q9BYQ2 154 aa4.77□□□□□ -1.65
FNDC3B-207ENST00000469491 KRTAP12-4P60329 112 aa4.76□□□□□ -1.65
FNDC3B-207ENST00000469491 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
FNDC3B-207ENST00000469491 MT4P47944 62 aa4.66□□□□□ -1.66
FNDC3B-207ENST00000469491 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.66
FNDC3B-207ENST00000469491 KRTAP4-6Q9BYQ5 205 aa4.63□□□□□ -1.67
FNDC3B-207ENST00000469491 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
FNDC3B-207ENST00000469491 MT3P25713 68 aa4.54□□□□□ -1.68
FNDC3B-207ENST00000469491 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
FNDC3B-207ENST00000469491 LCE3EQ5T5B0 92 aa4.5□□□□□ -1.69
FNDC3B-207ENST00000469491 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
FNDC3B-207ENST00000469491 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
FNDC3B-207ENST00000469491 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
FNDC3B-207ENST00000469491 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
FNDC3B-207ENST00000469491 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
FNDC3B-207ENST00000469491 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
FNDC3B-207ENST00000469491 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
FNDC3B-207ENST00000469491 PRM1P04553 51 aa4.15□□□□□ -1.75
FNDC3B-207ENST00000469491 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
FNDC3B-207ENST00000469491 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.8
FNDC3B-207ENST00000469491 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
FNDC3B-207ENST00000469491 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
FNDC3B-207ENST00000469491 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
FNDC3B-207ENST00000469491 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
FNDC3B-207ENST00000469491 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
FNDC3B-207ENST00000469491 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
FNDC3B-207ENST00000469491 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
FNDC3B-207ENST00000469491 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
FNDC3B-207ENST00000469491 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.86
FNDC3B-207ENST00000469491 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
FNDC3B-207ENST00000469491 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
FNDC3B-207ENST00000469491 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
FNDC3B-207ENST00000469491 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
FNDC3B-207ENST00000469491 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
FNDC3B-207ENST00000469491 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
FNDC3B-207ENST00000469491 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
FNDC3B-207ENST00000469491 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
FNDC3B-207ENST00000469491 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
FNDC3B-207ENST00000469491 MUC19Q7Z5P9 8384 aa2.97□□□□□ -1.93
FNDC3B-207ENST00000469491 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
FNDC3B-207ENST00000469491 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
FNDC3B-207ENST00000469491 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
FNDC3B-207ENST00000469491 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms