RNA–Protein interactions for RNA: ENST00000469316.5

RNF8-203, Transcript of ring finger protein 8, humanhuman

TSL 4

Gene RNF8, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8-203ENST00000469316 CCDC179H3BU77 68 aa7.42□□□□□ -1.22
RNF8-203ENST00000469316 ATP5EP56381 51 aaPredicted RBP7.42□□□□□ -1.22
RNF8-203ENST00000469316 KRTAP5-4Q6L8H1 288 aa7.38□□□□□ -1.23
RNF8-203ENST00000469316 LINC01558Q9Y6Z2 57 aa7.38□□□□□ -1.23
RNF8-203ENST00000469316 HMCN1Q96RW7 5635 aa7.34□□□□□ -1.23
RNF8-203ENST00000469316 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
RNF8-203ENST00000469316 UQCR11O14957 56 aa7.27□□□□□ -1.25
RNF8-203ENST00000469316 KRTAP4-6Q9BYQ5 205 aa7.27□□□□□ -1.25
RNF8-203ENST00000469316 KRTAP4-7Q9BYR0 210 aa7.26□□□□□ -1.25
RNF8-203ENST00000469316 TMEM258P61165 79 aa7.14□□□□□ -1.27
RNF8-203ENST00000469316 KRTAP5-10Q6L8G5 202 aa7.14□□□□□ -1.27
RNF8-203ENST00000469316 KRTAP25-1Q3LHN0 102 aa7.11□□□□□ -1.27
RNF8-203ENST00000469316 MIR22HGQ0VDD5 57 aa7.08□□□□□ -1.28
RNF8-203ENST00000469316 AHNAK2Q8IVF2 5795 aa7.07□□□□□ -1.28
RNF8-203ENST00000469316 K7ERS5 55 aa7.03□□□□□ -1.28
RNF8-203ENST00000469316 KRTAP5-5Q701N2 237 aaPredicted RBP7.01□□□□□ -1.29
RNF8-203ENST00000469316 KRTAP20-2Q3LI61 65 aa6.99□□□□□ -1.29
RNF8-203ENST00000469316 SPRR5A0A1B0GTR4 108 aa6.96□□□□□ -1.3
RNF8-203ENST00000469316 KRTAP5-3Q6L8H2 238 aa6.96□□□□□ -1.3
RNF8-203ENST00000469316 KRTAP12-4P60329 112 aa6.95□□□□□ -1.3
RNF8-203ENST00000469316 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
RNF8-203ENST00000469316 PCP4P48539 62 aa6.93□□□□□ -1.3
RNF8-203ENST00000469316 KRTAP5-7Q6L8G8 165 aa6.89□□□□□ -1.31
RNF8-203ENST00000469316 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
RNF8-203ENST00000469316 V9GYY9 64 aa6.85□□□□□ -1.31
RNF8-203ENST00000469316 PSPHP1O15172 72 aa6.83□□□□□ -1.32
RNF8-203ENST00000469316 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
RNF8-203ENST00000469316 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
RNF8-203ENST00000469316 Q1T7F1 81 aa6.74□□□□□ -1.33
RNF8-203ENST00000469316 LCE3CQ5T5A8 94 aa6.73□□□□□ -1.33
RNF8-203ENST00000469316 SYNE1Q8NF91 8797 aaKnown RBP6.64□□□□□ -1.35
RNF8-203ENST00000469316 A6NED7 52 aa6.6□□□□□ -1.35
RNF8-203ENST00000469316 CDC42SE1Q9NRR8 79 aa6.6□□□□□ -1.35
RNF8-203ENST00000469316 MT1AP04731 61 aa6.51□□□□□ -1.37
RNF8-203ENST00000469316 RPS28P62857 69 aaKnown RBP6.48□□□□□ -1.37
RNF8-203ENST00000469316 ROMO1P60602 79 aa6.47□□□□□ -1.37
RNF8-203ENST00000469316 KRTAP6-1Q3LI64 71 aa6.47□□□□□ -1.37
RNF8-203ENST00000469316 KRTAP4-11Q9BYQ6 195 aa6.43□□□□□ -1.38
RNF8-203ENST00000469316 KRTAP5-2Q701N4 177 aa6.42□□□□□ -1.38
RNF8-203ENST00000469316 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
RNF8-203ENST00000469316 KRTAP9-6A8MVA2 160 aa6.3□□□□□ -1.4
RNF8-203ENST00000469316 KRTAP6-2Q3LI66 62 aa6.23□□□□□ -1.41
RNF8-203ENST00000469316 KRTAP5-8O75690 187 aa6.2□□□□□ -1.42
RNF8-203ENST00000469316 MT3P25713 68 aa5.99□□□□□ -1.45
RNF8-203ENST00000469316 OBSCNQ5VST9 7968 aa5.97□□□□□ -1.45
RNF8-203ENST00000469316 KRTAP9-9Q9BYP9 154 aa5.96□□□□□ -1.46
RNF8-203ENST00000469316 MUC5ACP98088 5654 aa5.91□□□□□ -1.46
RNF8-203ENST00000469316 MUC5BQ9HC84 5762 aaPredicted RBP5.86□□□□□ -1.47
RNF8-203ENST00000469316 AHNAKQ09666 5890 aaKnown RBP5.86□□□□□ -1.47
RNF8-203ENST00000469316 KRTAP5-1Q6L8H4 278 aa5.8□□□□□ -1.48
RNF8-203ENST00000469316 BRK1Q8WUW1 75 aa5.68□□□□□ -1.5
RNF8-203ENST00000469316 PRO0628Q9UI54 55 aa5.57□□□□□ -1.52
RNF8-203ENST00000469316 LCE1EQ5T753 118 aa5.53□□□□□ -1.52
RNF8-203ENST00000469316 PMAIP1Q13794 54 aa5.39□□□□□ -1.55
RNF8-203ENST00000469316 LCE1BQ5T7P3 118 aa5.24□□□□□ -1.57
RNF8-203ENST00000469316 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
RNF8-203ENST00000469316 KTN1-AS1Q86SY8 53 aa5.17□□□□□ -1.58
RNF8-203ENST00000469316 LCE1CQ5T751 118 aa5.13□□□□□ -1.59
RNF8-203ENST00000469316 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
RNF8-203ENST00000469316 SVIPQ8NHG7 77 aa4.85□□□□□ -1.63
RNF8-203ENST00000469316 LCE3DQ9BYE3 92 aa4.83□□□□□ -1.64
RNF8-203ENST00000469316 KRTAP4-12Q9BQ66 201 aa4.8□□□□□ -1.64
RNF8-203ENST00000469316 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
RNF8-203ENST00000469316 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.62□□□□□ -1.67
RNF8-203ENST00000469316 LCE1FQ5T754 118 aa4.58□□□□□ -1.68
RNF8-203ENST00000469316 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
RNF8-203ENST00000469316 LUZP6Q538Z0 58 aa4.29□□□□□ -1.72
RNF8-203ENST00000469316 KRTAP21-2Q3LI59 83 aa4.26□□□□□ -1.73
RNF8-203ENST00000469316 PHGR1C9JFL3 82 aa4.19□□□□□ -1.74
RNF8-203ENST00000469316 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
RNF8-203ENST00000469316 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
RNF8-203ENST00000469316 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
RNF8-203ENST00000469316 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
RNF8-203ENST00000469316 INE1O15225 51 aa3.33□□□□□ -1.88
RNF8-203ENST00000469316 PRM1P04553 51 aa3.28□□□□□ -1.88
RNF8-203ENST00000469316 H3BS24 57 aa3.23□□□□□ -1.89
RNF8-203ENST00000469316 KRTAP21-1Q3LI58 79 aa3.19□□□□□ -1.9
RNF8-203ENST00000469316 MUC16Q8WXI7 14507 aa2.64□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms