RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
SMARCD3-205ENST00000469154 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
SMARCD3-205ENST00000469154 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.97□□□□□ -1.61
SMARCD3-205ENST00000469154 MT1LQ93083 61 aa4.89□□□□□ -1.63
SMARCD3-205ENST00000469154 MT1EP04732 61 aa4.89□□□□□ -1.63
SMARCD3-205ENST00000469154 KRTAP2-3P0C7H8 128 aa4.88□□□□□ -1.63
SMARCD3-205ENST00000469154 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
SMARCD3-205ENST00000469154 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
SMARCD3-205ENST00000469154 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
SMARCD3-205ENST00000469154 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
SMARCD3-205ENST00000469154 MUC12Q9UKN1 5478 aa4.83□□□□□ -1.64
SMARCD3-205ENST00000469154 KRTAP5-9P26371 169 aa4.81□□□□□ -1.64
SMARCD3-205ENST00000469154 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
SMARCD3-205ENST00000469154 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
SMARCD3-205ENST00000469154 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
SMARCD3-205ENST00000469154 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
SMARCD3-205ENST00000469154 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
SMARCD3-205ENST00000469154 SPRR2EP22531 72 aa4.64□□□□□ -1.67
SMARCD3-205ENST00000469154 SPRR2BP35325 72 aa4.64□□□□□ -1.67
SMARCD3-205ENST00000469154 SPRR2AP35326 72 aa4.64□□□□□ -1.67
SMARCD3-205ENST00000469154 MT1GP13640 62 aa4.6□□□□□ -1.67
SMARCD3-205ENST00000469154 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
SMARCD3-205ENST00000469154 MT1MQ8N339 61 aa4.57□□□□□ -1.68
SMARCD3-205ENST00000469154 KRTAP4-3Q9BYR4 195 aa4.56□□□□□ -1.68
SMARCD3-205ENST00000469154 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
SMARCD3-205ENST00000469154 NEBP20929 6669 aa4.51□□□□□ -1.69
SMARCD3-205ENST00000469154 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
SMARCD3-205ENST00000469154 SPRR2DP22532 72 aa4.46□□□□□ -1.69
SMARCD3-205ENST00000469154 KRTAP12-4P60329 112 aa4.3□□□□□ -1.72
SMARCD3-205ENST00000469154 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
SMARCD3-205ENST00000469154 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
SMARCD3-205ENST00000469154 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
SMARCD3-205ENST00000469154 MT1AP04731 61 aa4.17□□□□□ -1.74
SMARCD3-205ENST00000469154 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
SMARCD3-205ENST00000469154 KRTAP4-6Q9BYQ5 205 aa4.13□□□□□ -1.75
SMARCD3-205ENST00000469154 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
SMARCD3-205ENST00000469154 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
SMARCD3-205ENST00000469154 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
SMARCD3-205ENST00000469154 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
SMARCD3-205ENST00000469154 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
SMARCD3-205ENST00000469154 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
SMARCD3-205ENST00000469154 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
SMARCD3-205ENST00000469154 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
SMARCD3-205ENST00000469154 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
SMARCD3-205ENST00000469154 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
SMARCD3-205ENST00000469154 MT4P47944 62 aa3.91□□□□□ -1.78
SMARCD3-205ENST00000469154 LCE1DQ5T752 114 aa3.84□□□□□ -1.79
SMARCD3-205ENST00000469154 PRM1P04553 51 aa3.81□□□□□ -1.8
SMARCD3-205ENST00000469154 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
SMARCD3-205ENST00000469154 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
SMARCD3-205ENST00000469154 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
SMARCD3-205ENST00000469154 MT3P25713 68 aa3.71□□□□□ -1.82
SMARCD3-205ENST00000469154 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
SMARCD3-205ENST00000469154 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
SMARCD3-205ENST00000469154 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
SMARCD3-205ENST00000469154 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
SMARCD3-205ENST00000469154 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
SMARCD3-205ENST00000469154 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
SMARCD3-205ENST00000469154 KRTAP5-10Q6L8G5 202 aa3.25□□□□□ -1.89
SMARCD3-205ENST00000469154 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
SMARCD3-205ENST00000469154 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
SMARCD3-205ENST00000469154 KRTAP5-8O75690 187 aa3.15□□□□□ -1.9
SMARCD3-205ENST00000469154 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
SMARCD3-205ENST00000469154 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
SMARCD3-205ENST00000469154 MUC5ACP98088 5654 aa3.09□□□□□ -1.92
SMARCD3-205ENST00000469154 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
SMARCD3-205ENST00000469154 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
SMARCD3-205ENST00000469154 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
SMARCD3-205ENST00000469154 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
SMARCD3-205ENST00000469154 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
SMARCD3-205ENST00000469154 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
SMARCD3-205ENST00000469154 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
SMARCD3-205ENST00000469154 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
SMARCD3-205ENST00000469154 KRTAP21-1Q3LI58 79 aa2.43□□□□□ -2.02
SMARCD3-205ENST00000469154 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
SMARCD3-205ENST00000469154 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
SMARCD3-205ENST00000469154 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
SMARCD3-205ENST00000469154 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 51.9 ms