RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
SHANK2-214ENST00000468619 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
SHANK2-214ENST00000468619 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
SHANK2-214ENST00000468619 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
SHANK2-214ENST00000468619 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
SHANK2-214ENST00000468619 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
SHANK2-214ENST00000468619 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
SHANK2-214ENST00000468619 MT1LQ93083 61 aa4.4□□□□□ -1.71
SHANK2-214ENST00000468619 MT1EP04732 61 aa4.37□□□□□ -1.71
SHANK2-214ENST00000468619 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
SHANK2-214ENST00000468619 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
SHANK2-214ENST00000468619 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.29□□□□□ -1.72
SHANK2-214ENST00000468619 MDN1Q9NU22 5596 aa4.27□□□□□ -1.73
SHANK2-214ENST00000468619 DSTQ03001 7570 aaKnown RBP4.27□□□□□ -1.73
SHANK2-214ENST00000468619 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
SHANK2-214ENST00000468619 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
SHANK2-214ENST00000468619 MT1GP13640 62 aa4.24□□□□□ -1.73
SHANK2-214ENST00000468619 KRTAP5-9P26371 169 aa4.21□□□□□ -1.73
SHANK2-214ENST00000468619 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
SHANK2-214ENST00000468619 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
SHANK2-214ENST00000468619 MT1MQ8N339 61 aa4.12□□□□□ -1.75
SHANK2-214ENST00000468619 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
SHANK2-214ENST00000468619 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
SHANK2-214ENST00000468619 SPRR2EP22531 72 aa4.1□□□□□ -1.75
SHANK2-214ENST00000468619 SPRR2BP35325 72 aa4.1□□□□□ -1.75
SHANK2-214ENST00000468619 SPRR2AP35326 72 aa4.1□□□□□ -1.75
SHANK2-214ENST00000468619 KRTAP4-9Q9BYQ8 210 aa4.1□□□□□ -1.75
SHANK2-214ENST00000468619 SYNE1Q8NF91 8797 aaKnown RBP4.08□□□□□ -1.76
SHANK2-214ENST00000468619 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
SHANK2-214ENST00000468619 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
SHANK2-214ENST00000468619 NEBP20929 6669 aa4.01□□□□□ -1.77
SHANK2-214ENST00000468619 PRM1P04553 51 aa3.97□□□□□ -1.77
SHANK2-214ENST00000468619 SPRR2DP22532 72 aa3.94□□□□□ -1.78
SHANK2-214ENST00000468619 KRTAP5-5Q701N2 237 aaPredicted RBP3.9□□□□□ -1.79
SHANK2-214ENST00000468619 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
SHANK2-214ENST00000468619 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
SHANK2-214ENST00000468619 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
SHANK2-214ENST00000468619 MT1AP04731 61 aa3.85□□□□□ -1.79
SHANK2-214ENST00000468619 KRTAP6-1Q3LI64 71 aa3.78□□□□□ -1.8
SHANK2-214ENST00000468619 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
SHANK2-214ENST00000468619 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.83
SHANK2-214ENST00000468619 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
SHANK2-214ENST00000468619 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
SHANK2-214ENST00000468619 MT4P47944 62 aa3.47□□□□□ -1.85
SHANK2-214ENST00000468619 KRTAP9-4Q9BYQ2 154 aa3.44□□□□□ -1.86
SHANK2-214ENST00000468619 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
SHANK2-214ENST00000468619 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
SHANK2-214ENST00000468619 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
SHANK2-214ENST00000468619 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
SHANK2-214ENST00000468619 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
SHANK2-214ENST00000468619 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
SHANK2-214ENST00000468619 MT3P25713 68 aa3.27□□□□□ -1.89
SHANK2-214ENST00000468619 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
SHANK2-214ENST00000468619 KRTAP5-3Q6L8H2 238 aa3.18□□□□□ -1.9
SHANK2-214ENST00000468619 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
SHANK2-214ENST00000468619 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
SHANK2-214ENST00000468619 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
SHANK2-214ENST00000468619 MUC5ACP98088 5654 aa2.9□□□□□ -1.95
SHANK2-214ENST00000468619 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
SHANK2-214ENST00000468619 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
SHANK2-214ENST00000468619 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.97
SHANK2-214ENST00000468619 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
SHANK2-214ENST00000468619 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
SHANK2-214ENST00000468619 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
SHANK2-214ENST00000468619 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
SHANK2-214ENST00000468619 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
SHANK2-214ENST00000468619 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
SHANK2-214ENST00000468619 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
SHANK2-214ENST00000468619 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
SHANK2-214ENST00000468619 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SHANK2-214ENST00000468619 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
SHANK2-214ENST00000468619 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
SHANK2-214ENST00000468619 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
SHANK2-214ENST00000468619 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
SHANK2-214ENST00000468619 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
SHANK2-214ENST00000468619 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
SHANK2-214ENST00000468619 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
SHANK2-214ENST00000468619 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 59.8 ms