RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 KRTAP19-5Q3LI72 72 aa3.1□□□□□ -1.91
LCA5-203ENST00000467898 KRTAP9-7A8MTY7 169 aa3.09□□□□□ -1.91
LCA5-203ENST00000467898 KRTAP4-8A0A0G2JLE6 195 aa3.08□□□□□ -1.92
LCA5-203ENST00000467898 KRTAP4-8Q9BYQ9 185 aa3.08□□□□□ -1.92
LCA5-203ENST00000467898 KRTAP19-6Q3LI70 58 aa3.06□□□□□ -1.92
LCA5-203ENST00000467898 LCE1AQ5T7P2 110 aa3.06□□□□□ -1.92
LCA5-203ENST00000467898 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
LCA5-203ENST00000467898 KRTAP19-7Q3SYF9 63 aa3.02□□□□□ -1.93
LCA5-203ENST00000467898 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
LCA5-203ENST00000467898 MT1EP04732 61 aa2.94□□□□□ -1.94
LCA5-203ENST00000467898 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
LCA5-203ENST00000467898 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
LCA5-203ENST00000467898 MT1LQ93083 61 aa2.9□□□□□ -1.95
LCA5-203ENST00000467898 KRTAP4-7Q9BYR0 210 aa2.87□□□□□ -1.95
LCA5-203ENST00000467898 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
LCA5-203ENST00000467898 PRM1P04553 51 aa2.84□□□□□ -1.95
LCA5-203ENST00000467898 LCE3BQ5TA77 95 aa2.84□□□□□ -1.95
LCA5-203ENST00000467898 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
LCA5-203ENST00000467898 KRTAP9-4Q9BYQ2 154 aa2.81□□□□□ -1.96
LCA5-203ENST00000467898 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
LCA5-203ENST00000467898 MUC12Q9UKN1 5478 aa2.78□□□□□ -1.96
LCA5-203ENST00000467898 LCE1DQ5T752 114 aa2.78□□□□□ -1.96
LCA5-203ENST00000467898 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
LCA5-203ENST00000467898 MT1AP04731 61 aa2.77□□□□□ -1.97
LCA5-203ENST00000467898 KRTAP19-3Q7Z4W3 81 aa2.76□□□□□ -1.97
LCA5-203ENST00000467898 MT1MQ8N339 61 aa2.75□□□□□ -1.97
LCA5-203ENST00000467898 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
LCA5-203ENST00000467898 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
LCA5-203ENST00000467898 MT1GP13640 62 aa2.73□□□□□ -1.97
LCA5-203ENST00000467898 LCE5AQ5TCM9 118 aa2.73□□□□□ -1.97
LCA5-203ENST00000467898 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.97
LCA5-203ENST00000467898 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
LCA5-203ENST00000467898 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
LCA5-203ENST00000467898 KRTAP4-9Q9BYQ8 210 aa2.7□□□□□ -1.98
LCA5-203ENST00000467898 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
LCA5-203ENST00000467898 SYNE2Q8WXH0 6885 aaKnown RBP2.67□□□□□ -1.98
LCA5-203ENST00000467898 NEBP20929 6669 aa2.67□□□□□ -1.98
LCA5-203ENST00000467898 KRTAP5-9P26371 169 aa2.66□□□□□ -1.98
LCA5-203ENST00000467898 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
LCA5-203ENST00000467898 KRTAP5-3Q6L8H2 238 aa2.65□□□□□ -1.98
LCA5-203ENST00000467898 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.98
LCA5-203ENST00000467898 MDN1Q9NU22 5596 aa2.61□□□□□ -1.99
LCA5-203ENST00000467898 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
LCA5-203ENST00000467898 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
LCA5-203ENST00000467898 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
LCA5-203ENST00000467898 SPRR2EP22531 72 aa2.52□□□□□ -2.01
LCA5-203ENST00000467898 SPRR2BP35325 72 aa2.52□□□□□ -2.01
LCA5-203ENST00000467898 SPRR2AP35326 72 aa2.52□□□□□ -2.01
LCA5-203ENST00000467898 KRTAP4-11Q9BYQ6 195 aa2.51□□□□□ -2.01
LCA5-203ENST00000467898 MT3P25713 68 aa2.47□□□□□ -2.01
LCA5-203ENST00000467898 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
LCA5-203ENST00000467898 SPRR2DP22532 72 aa2.42□□□□□ -2.02
LCA5-203ENST00000467898 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
LCA5-203ENST00000467898 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.05
LCA5-203ENST00000467898 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
LCA5-203ENST00000467898 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
LCA5-203ENST00000467898 KRTAP5-10Q6L8G5 202 aa2.19□□□□□ -2.06
LCA5-203ENST00000467898 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
LCA5-203ENST00000467898 LCE4AQ5TA78 99 aa2.14□□□□□ -2.07
LCA5-203ENST00000467898 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
LCA5-203ENST00000467898 MT4P47944 62 aa2.11□□□□□ -2.07
LCA5-203ENST00000467898 KRTAP20-2Q3LI61 65 aa2.11□□□□□ -2.07
LCA5-203ENST00000467898 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
LCA5-203ENST00000467898 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
LCA5-203ENST00000467898 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
LCA5-203ENST00000467898 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
LCA5-203ENST00000467898 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
LCA5-203ENST00000467898 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
LCA5-203ENST00000467898 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
LCA5-203ENST00000467898 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
LCA5-203ENST00000467898 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
LCA5-203ENST00000467898 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
LCA5-203ENST00000467898 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.15
LCA5-203ENST00000467898 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
LCA5-203ENST00000467898 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
LCA5-203ENST00000467898 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
LCA5-203ENST00000467898 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 39.5 ms