RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, human

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC16A-208	ENST00000467838	KRTAP2-1	Q9BYU5	128 aa		5.09	□□□□□ -1.59
SEC16A-208	ENST00000467838	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.07	□□□□□ -1.6
SEC16A-208	ENST00000467838	KMT2D	O14686	5537 aa		5.06	□□□□□ -1.6
SEC16A-208	ENST00000467838	CRCT1	Q9UGL9	99 aa		5	□□□□□ -1.61
SEC16A-208	ENST00000467838	MT1L	Q93083	61 aa		5	□□□□□ -1.61
SEC16A-208	ENST00000467838	MT1E	P04732	61 aa		4.98	□□□□□ -1.61
SEC16A-208	ENST00000467838	KRTAP4-7	Q9BYR0	210 aa		4.98	□□□□□ -1.61
SEC16A-208	ENST00000467838	MACF1	Q9UPN3	7388 aa	Known RBP	4.85	□□□□□ -1.63
SEC16A-208	ENST00000467838	KRTAP9-6	A0A140TA67	174 aa		4.78	□□□□□ -1.64
SEC16A-208	ENST00000467838	SYNE2	Q8WXH0	6885 aa	Known RBP	4.75	□□□□□ -1.65
SEC16A-208	ENST00000467838	MUC12	Q9UKN1	5478 aa		4.66	□□□□□ -1.66
SEC16A-208	ENST00000467838	SPRR2F	Q96RM1	72 aa		4.65	□□□□□ -1.66
SEC16A-208	ENST00000467838	MT1M	Q8N339	61 aa		4.64	□□□□□ -1.67
SEC16A-208	ENST00000467838	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.63	□□□□□ -1.67
SEC16A-208	ENST00000467838	KRTAP4-3	Q9BYR4	195 aa		4.63	□□□□□ -1.67
SEC16A-208	ENST00000467838	KRTAP19-3	Q7Z4W3	81 aa		4.62	□□□□□ -1.67
SEC16A-208	ENST00000467838	MT1G	P13640	62 aa		4.61	□□□□□ -1.67
SEC16A-208	ENST00000467838	KRTAP4-12	Q9BQ66	201 aa		4.6	□□□□□ -1.67
SEC16A-208	ENST00000467838	KRTAP5-9	P26371	169 aa		4.58	□□□□□ -1.68
SEC16A-208	ENST00000467838	LCE3B	Q5TA77	95 aa		4.52	□□□□□ -1.69
SEC16A-208	ENST00000467838	MDN1	Q9NU22	5596 aa		4.51	□□□□□ -1.69
SEC16A-208	ENST00000467838	KRTAP6-3	Q3LI67	103 aa		4.51	□□□□□ -1.69
SEC16A-208	ENST00000467838	LCE5A	Q5TCM9	118 aa		4.45	□□□□□ -1.7
SEC16A-208	ENST00000467838	KRTAP12-4	P60329	112 aa		4.44	□□□□□ -1.7
SEC16A-208	ENST00000467838	LCE1A	Q5T7P2	110 aa		4.44	□□□□□ -1.7
SEC16A-208	ENST00000467838	SPRR2E	P22531	72 aa		4.42	□□□□□ -1.7
SEC16A-208	ENST00000467838	SPRR2B	P35325	72 aa		4.42	□□□□□ -1.7
SEC16A-208	ENST00000467838	SPRR2A	P35326	72 aa		4.42	□□□□□ -1.7
SEC16A-208	ENST00000467838	KRTAP9-9	Q9BYP9	154 aa		4.42	□□□□□ -1.7
SEC16A-208	ENST00000467838	KRTAP9-4	Q9BYQ2	154 aa		4.42	□□□□□ -1.7
SEC16A-208	ENST00000467838	KRTAP9-7	A8MTY7	169 aa		4.38	□□□□□ -1.71
SEC16A-208	ENST00000467838	MT1A	P04731	61 aa		4.31	□□□□□ -1.72
SEC16A-208	ENST00000467838	DST	Q03001	7570 aa	Known RBP	4.29	□□□□□ -1.72
SEC16A-208	ENST00000467838	NEB	P20929	6669 aa		4.28	□□□□□ -1.72
SEC16A-208	ENST00000467838	LCE1D	Q5T752	114 aa		4.25	□□□□□ -1.73
SEC16A-208	ENST00000467838	SPRR2D	P22532	72 aa		4.25	□□□□□ -1.73
SEC16A-208	ENST00000467838	KRTAP6-1	Q3LI64	71 aa		4.22	□□□□□ -1.73
SEC16A-208	ENST00000467838	KRTAP4-9	Q9BYQ8	210 aa		4.2	□□□□□ -1.74
SEC16A-208	ENST00000467838	LCE4A	Q5TA78	99 aa		4.16	□□□□□ -1.74
SEC16A-208	ENST00000467838	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.14	□□□□□ -1.75
SEC16A-208	ENST00000467838	LCE3D	Q9BYE3	92 aa		4.12	□□□□□ -1.75
SEC16A-208	ENST00000467838	LCE3E	Q5T5B0	92 aa		4.09	□□□□□ -1.75
SEC16A-208	ENST00000467838	SYNE1	Q8NF91	8797 aa	Known RBP	4.02	□□□□□ -1.77
SEC16A-208	ENST00000467838	KRTAP4-2	Q9BYR5	136 aa		3.99	□□□□□ -1.77
SEC16A-208	ENST00000467838	KRTAP4-11	Q9BYQ6	195 aa		3.97	□□□□□ -1.77
SEC16A-208	ENST00000467838	PRM1	P04553	51 aa		3.95	□□□□□ -1.78
SEC16A-208	ENST00000467838	KRTAP20-1	Q3LI63	56 aa		3.88	□□□□□ -1.79
SEC16A-208	ENST00000467838	KRTAP2-2	Q9BYT5	123 aa		3.86	□□□□□ -1.79
SEC16A-208	ENST00000467838	KRTAP6-2	Q3LI66	62 aa		3.82	□□□□□ -1.8
SEC16A-208	ENST00000467838	KRTAP5-4	Q6L8H1	288 aa		3.82	□□□□□ -1.8
SEC16A-208	ENST00000467838	MT3	P25713	68 aa		3.75	□□□□□ -1.81
SEC16A-208	ENST00000467838	MT4	P47944	62 aa		3.71	□□□□□ -1.82
SEC16A-208	ENST00000467838	HMCN1	Q96RW7	5635 aa		3.61	□□□□□ -1.83
SEC16A-208	ENST00000467838	KRTAP20-2	Q3LI61	65 aa		3.58	□□□□□ -1.84
SEC16A-208	ENST00000467838	KRTAP5-3	Q6L8H2	238 aa		3.47	□□□□□ -1.85
SEC16A-208	ENST00000467838	KRTAP5-2	Q701N4	177 aa		3.46	□□□□□ -1.86
SEC16A-208	ENST00000467838	OBSCN	Q5VST9	7968 aa		3.39	□□□□□ -1.87
SEC16A-208	ENST00000467838	AHNAK2	Q8IVF2	5795 aa		3.2	□□□□□ -1.9
SEC16A-208	ENST00000467838	MUC5AC	P98088	5654 aa		3.17	□□□□□ -1.9
SEC16A-208	ENST00000467838	LCE1E	Q5T753	118 aa		3.08	□□□□□ -1.92
SEC16A-208	ENST00000467838	KRTAP5-10	Q6L8G5	202 aa		3.05	□□□□□ -1.92
SEC16A-208	ENST00000467838	KRTAP5-1	Q6L8H4	278 aa		3.03	□□□□□ -1.92
SEC16A-208	ENST00000467838	KRTAP5-8	O75690	187 aa		3	□□□□□ -1.93
SEC16A-208	ENST00000467838	GPR98	Q8WXG9	6306 aa		2.93	□□□□□ -1.94
SEC16A-208	ENST00000467838	LCE1B	Q5T7P3	118 aa		2.92	□□□□□ -1.94
SEC16A-208	ENST00000467838	LCE1C	Q5T751	118 aa		2.9	□□□□□ -1.95
SEC16A-208	ENST00000467838	KRTAP5-7	Q6L8G8	165 aa		2.87	□□□□□ -1.95
SEC16A-208	ENST00000467838	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.8	□□□□□ -1.96
SEC16A-208	ENST00000467838	KRTAP21-2	Q3LI59	83 aa		2.74	□□□□□ -1.97
SEC16A-208	ENST00000467838	KRTAP5-11	Q6L8G4	156 aa		2.67	□□□□□ -1.98
SEC16A-208	ENST00000467838	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.61	□□□□□ -1.99
SEC16A-208	ENST00000467838	KRTAP21-1	Q3LI58	79 aa		2.56	□□□□□ -2
SEC16A-208	ENST00000467838	AHNAK	Q09666	5890 aa	Known RBP	2.42	□□□□□ -2.02
SEC16A-208	ENST00000467838	KRTAP4-4	Q9BYR3	166 aa		2.4	□□□□□ -2.03
SEC16A-208	ENST00000467838	LCE1F	Q5T754	118 aa		2.37	□□□□□ -2.03
SEC16A-208	ENST00000467838	MUC19	Q7Z5P9	8384 aa		2.18	□□□□□ -2.06
SEC16A-208	ENST00000467838	PHGR1	C9JFL3	82 aa		2.18	□□□□□ -2.06
SEC16A-208	ENST00000467838	MUC16	Q8WXI7	14507 aa		1.44	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 148.3 ms