RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
CCHCR1-211ENST00000467553 KRTAP4-9Q9BYQ8 210 aa5.09□□□□□ -1.59
CCHCR1-211ENST00000467553 Q1T7F1 81 aa5.07□□□□□ -1.6
CCHCR1-211ENST00000467553 K7ERS5 55 aa5.02□□□□□ -1.61
CCHCR1-211ENST00000467553 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
CCHCR1-211ENST00000467553 LCE1DQ5T752 114 aa4.99□□□□□ -1.61
CCHCR1-211ENST00000467553 MT1LQ93083 61 aa4.99□□□□□ -1.61
CCHCR1-211ENST00000467553 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
CCHCR1-211ENST00000467553 MT1MQ8N339 61 aa4.96□□□□□ -1.62
CCHCR1-211ENST00000467553 PCP4P48539 62 aa4.95□□□□□ -1.62
CCHCR1-211ENST00000467553 A6NED7 52 aa4.93□□□□□ -1.62
CCHCR1-211ENST00000467553 KRTAP25-1Q3LHN0 102 aa4.92□□□□□ -1.62
CCHCR1-211ENST00000467553 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
CCHCR1-211ENST00000467553 MT4P47944 62 aa4.89□□□□□ -1.63
CCHCR1-211ENST00000467553 RPS28P62857 69 aaKnown RBP4.89□□□□□ -1.63
CCHCR1-211ENST00000467553 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
CCHCR1-211ENST00000467553 KRTAP4-3Q9BYR4 195 aa4.85□□□□□ -1.63
CCHCR1-211ENST00000467553 AHNAK2Q8IVF2 5795 aa4.84□□□□□ -1.63
CCHCR1-211ENST00000467553 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
CCHCR1-211ENST00000467553 KRTAP5-10Q6L8G5 202 aa4.75□□□□□ -1.65
CCHCR1-211ENST00000467553 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
CCHCR1-211ENST00000467553 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
CCHCR1-211ENST00000467553 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
CCHCR1-211ENST00000467553 ROMO1P60602 79 aa4.69□□□□□ -1.66
CCHCR1-211ENST00000467553 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
CCHCR1-211ENST00000467553 KRTAP5-7Q6L8G8 165 aa4.62□□□□□ -1.67
CCHCR1-211ENST00000467553 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
CCHCR1-211ENST00000467553 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
CCHCR1-211ENST00000467553 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
CCHCR1-211ENST00000467553 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
CCHCR1-211ENST00000467553 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
CCHCR1-211ENST00000467553 KRTAP12-4P60329 112 aa4.56□□□□□ -1.68
CCHCR1-211ENST00000467553 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
CCHCR1-211ENST00000467553 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
CCHCR1-211ENST00000467553 SYNE1Q8NF91 8797 aaKnown RBP4.45□□□□□ -1.7
CCHCR1-211ENST00000467553 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
CCHCR1-211ENST00000467553 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
CCHCR1-211ENST00000467553 MT1AP04731 61 aa4.24□□□□□ -1.73
CCHCR1-211ENST00000467553 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
CCHCR1-211ENST00000467553 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
CCHCR1-211ENST00000467553 KRTAP5-2Q701N4 177 aa4.22□□□□□ -1.73
CCHCR1-211ENST00000467553 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
CCHCR1-211ENST00000467553 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
CCHCR1-211ENST00000467553 KRTAP5-8O75690 187 aa4.08□□□□□ -1.76
CCHCR1-211ENST00000467553 MUC5BQ9HC84 5762 aaPredicted RBP4.04□□□□□ -1.76
CCHCR1-211ENST00000467553 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
CCHCR1-211ENST00000467553 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
CCHCR1-211ENST00000467553 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
CCHCR1-211ENST00000467553 SVIPQ8NHG7 77 aa4.01□□□□□ -1.77
CCHCR1-211ENST00000467553 MUC5ACP98088 5654 aa4.01□□□□□ -1.77
CCHCR1-211ENST00000467553 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
CCHCR1-211ENST00000467553 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
CCHCR1-211ENST00000467553 MT3P25713 68 aa3.9□□□□□ -1.79
CCHCR1-211ENST00000467553 PRO0628Q9UI54 55 aa3.82□□□□□ -1.8
CCHCR1-211ENST00000467553 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
CCHCR1-211ENST00000467553 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
CCHCR1-211ENST00000467553 KTN1-AS1Q86SY8 53 aa3.64□□□□□ -1.83
CCHCR1-211ENST00000467553 KRTAP4-2Q9BYR5 136 aa3.39□□□□□ -1.87
CCHCR1-211ENST00000467553 LCE1CQ5T751 118 aa3.38□□□□□ -1.87
CCHCR1-211ENST00000467553 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
CCHCR1-211ENST00000467553 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
CCHCR1-211ENST00000467553 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
CCHCR1-211ENST00000467553 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
CCHCR1-211ENST00000467553 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
CCHCR1-211ENST00000467553 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
CCHCR1-211ENST00000467553 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
CCHCR1-211ENST00000467553 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
CCHCR1-211ENST00000467553 H3BS24 57 aa2.84□□□□□ -1.95
CCHCR1-211ENST00000467553 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
CCHCR1-211ENST00000467553 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
CCHCR1-211ENST00000467553 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
CCHCR1-211ENST00000467553 A0A0A0MQY5 61 aa2.6□□□□□ -1.99
CCHCR1-211ENST00000467553 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
CCHCR1-211ENST00000467553 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
CCHCR1-211ENST00000467553 PRM1P04553 51 aa2.41□□□□□ -2.02
CCHCR1-211ENST00000467553 INE1O15225 51 aa2.17□□□□□ -2.06
CCHCR1-211ENST00000467553 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
CCHCR1-211ENST00000467553 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 54 ms