RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 KRTAP5-9P26371 169 aa3.34□□□□□ -1.87
PRPF3-202ENST00000467329 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.88
PRPF3-202ENST00000467329 KRTAP9-7A8MTY7 169 aa3.33□□□□□ -1.88
PRPF3-202ENST00000467329 SPRR2FQ96RM1 72 aa3.32□□□□□ -1.88
PRPF3-202ENST00000467329 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
PRPF3-202ENST00000467329 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
PRPF3-202ENST00000467329 KRTAP6-3Q3LI67 103 aa3.29□□□□□ -1.88
PRPF3-202ENST00000467329 MT1GP13640 62 aa3.28□□□□□ -1.88
PRPF3-202ENST00000467329 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
PRPF3-202ENST00000467329 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
PRPF3-202ENST00000467329 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
PRPF3-202ENST00000467329 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
PRPF3-202ENST00000467329 MT1MQ8N339 61 aa3.23□□□□□ -1.89
PRPF3-202ENST00000467329 LOC100996750A0A140TA64 210 aa3.22□□□□□ -1.89
PRPF3-202ENST00000467329 KRTAP4-6Q9BYQ5 205 aa3.22□□□□□ -1.89
PRPF3-202ENST00000467329 LCE1AQ5T7P2 110 aa3.2□□□□□ -1.9
PRPF3-202ENST00000467329 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
PRPF3-202ENST00000467329 KRTAP4-7Q9BYR0 210 aa3.19□□□□□ -1.9
PRPF3-202ENST00000467329 SPRR2EP22531 72 aa3.17□□□□□ -1.9
PRPF3-202ENST00000467329 SPRR2BP35325 72 aa3.17□□□□□ -1.9
PRPF3-202ENST00000467329 SPRR2AP35326 72 aa3.17□□□□□ -1.9
PRPF3-202ENST00000467329 MUC12Q9UKN1 5478 aa3.15□□□□□ -1.91
PRPF3-202ENST00000467329 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
PRPF3-202ENST00000467329 SYNE2Q8WXH0 6885 aaKnown RBP3.12□□□□□ -1.91
PRPF3-202ENST00000467329 KRTAP9-6A8MVA2 160 aa3.12□□□□□ -1.91
PRPF3-202ENST00000467329 KRTAP4-3Q9BYR4 195 aa3.11□□□□□ -1.91
PRPF3-202ENST00000467329 SPRR2DP22532 72 aa3.06□□□□□ -1.92
PRPF3-202ENST00000467329 LCE3BQ5TA77 95 aa3.03□□□□□ -1.93
PRPF3-202ENST00000467329 KRTAP5-3Q6L8H2 238 aa3.03□□□□□ -1.93
PRPF3-202ENST00000467329 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
PRPF3-202ENST00000467329 NEBP20929 6669 aa2.99□□□□□ -1.93
PRPF3-202ENST00000467329 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
PRPF3-202ENST00000467329 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
PRPF3-202ENST00000467329 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
PRPF3-202ENST00000467329 KRTAP5-5Q701N2 237 aaPredicted RBP2.93□□□□□ -1.94
PRPF3-202ENST00000467329 INE1O15225 51 aa2.9□□□□□ -1.94
PRPF3-202ENST00000467329 MT1AP04731 61 aa2.89□□□□□ -1.95
PRPF3-202ENST00000467329 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
PRPF3-202ENST00000467329 LCE1DQ5T752 114 aa2.81□□□□□ -1.96
PRPF3-202ENST00000467329 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
PRPF3-202ENST00000467329 KRTAP20-1Q3LI63 56 aa2.79□□□□□ -1.96
PRPF3-202ENST00000467329 KRTAP2-2Q9BYT5 123 aa2.79□□□□□ -1.96
PRPF3-202ENST00000467329 DSTQ03001 7570 aaKnown RBP2.77□□□□□ -1.97
PRPF3-202ENST00000467329 GPR98Q8WXG9 6306 aa2.74□□□□□ -1.97
PRPF3-202ENST00000467329 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
PRPF3-202ENST00000467329 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
PRPF3-202ENST00000467329 KRTAP4-9Q9BYQ8 210 aa2.66□□□□□ -1.98
PRPF3-202ENST00000467329 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
PRPF3-202ENST00000467329 MT3P25713 68 aa2.61□□□□□ -1.99
PRPF3-202ENST00000467329 MT4P47944 62 aa2.61□□□□□ -1.99
PRPF3-202ENST00000467329 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
PRPF3-202ENST00000467329 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -1.99
PRPF3-202ENST00000467329 LCE1FQ5T754 118 aa2.58□□□□□ -2
PRPF3-202ENST00000467329 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
PRPF3-202ENST00000467329 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
PRPF3-202ENST00000467329 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
PRPF3-202ENST00000467329 LCE3EQ5T5B0 92 aa2.44□□□□□ -2.02
PRPF3-202ENST00000467329 LCE1EQ5T753 118 aa2.34□□□□□ -2.04
PRPF3-202ENST00000467329 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
PRPF3-202ENST00000467329 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
PRPF3-202ENST00000467329 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
PRPF3-202ENST00000467329 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
PRPF3-202ENST00000467329 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
PRPF3-202ENST00000467329 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
PRPF3-202ENST00000467329 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
PRPF3-202ENST00000467329 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.06
PRPF3-202ENST00000467329 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
PRPF3-202ENST00000467329 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
PRPF3-202ENST00000467329 PRM1P04553 51 aa2.1□□□□□ -2.07
PRPF3-202ENST00000467329 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
PRPF3-202ENST00000467329 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
PRPF3-202ENST00000467329 KRTAP5-11Q6L8G4 156 aa1.88□□□□□ -2.11
PRPF3-202ENST00000467329 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
PRPF3-202ENST00000467329 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
PRPF3-202ENST00000467329 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
PRPF3-202ENST00000467329 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
PRPF3-202ENST00000467329 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
PRPF3-202ENST00000467329 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 43.3 ms