RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 TNP1P09430 55 aa1.91□□□□□ -2.1
CXXC4-202ENST00000466963 SEC61GP60059 68 aa1.91□□□□□ -2.1
CXXC4-202ENST00000466963 COL5A1-AS1Q5SY13 56 aa1.91□□□□□ -2.1
CXXC4-202ENST00000466963 SPANXA2-OT1Q8N9U9 137 aa1.9□□□□□ -2.11
CXXC4-202ENST00000466963 HIST1H4AP62805 103 aaKnown RBP1.9□□□□□ -2.11
CXXC4-202ENST00000466963 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
CXXC4-202ENST00000466963 SMIM26A0A096LP01 95 aa1.88□□□□□ -2.11
CXXC4-202ENST00000466963 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
CXXC4-202ENST00000466963 SERP1Q9Y6X1 66 aa1.87□□□□□ -2.11
CXXC4-202ENST00000466963 LCE1EQ5T753 118 aa1.85□□□□□ -2.11
CXXC4-202ENST00000466963 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
CXXC4-202ENST00000466963 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
CXXC4-202ENST00000466963 LCE3AQ5TA76 89 aa1.81□□□□□ -2.12
CXXC4-202ENST00000466963 PRAC1Q96KF2 57 aa1.81□□□□□ -2.12
CXXC4-202ENST00000466963 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
CXXC4-202ENST00000466963 KRTAP12-3P60328 96 aa1.8□□□□□ -2.12
CXXC4-202ENST00000466963 ETDBQ3ZM63 59 aa1.8□□□□□ -2.12
CXXC4-202ENST00000466963 J3QR89 54 aa1.79□□□□□ -2.12
CXXC4-202ENST00000466963 LCE3CQ5T5A8 94 aa1.79□□□□□ -2.12
CXXC4-202ENST00000466963 MT1AP04731 61 aa1.78□□□□□ -2.12
CXXC4-202ENST00000466963 A0A1B0GU33 70 aa1.78□□□□□ -2.12
CXXC4-202ENST00000466963 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
CXXC4-202ENST00000466963 KRTAP13-4Q3LI77 160 aa1.77□□□□□ -2.13
CXXC4-202ENST00000466963 KRTAP25-1Q3LHN0 102 aa1.75□□□□□ -2.13
CXXC4-202ENST00000466963 SPINT4Q6UDR6 99 aa1.75□□□□□ -2.13
CXXC4-202ENST00000466963 PRR15LQ9BU68 103 aa1.74□□□□□ -2.13
CXXC4-202ENST00000466963 KRTAP4-3Q9BYR4 195 aa1.74□□□□□ -2.13
CXXC4-202ENST00000466963 NDUFAF8A1L188 74 aa1.72□□□□□ -2.13
CXXC4-202ENST00000466963 PCP4L1A6NKN8 68 aa1.7□□□□□ -2.14
CXXC4-202ENST00000466963 KRTAP9-6A8MVA2 160 aa1.7□□□□□ -2.14
CXXC4-202ENST00000466963 H7BZZ5 65 aa1.69□□□□□ -2.14
CXXC4-202ENST00000466963 COA5Q86WW8 74 aa1.67□□□□□ -2.14
CXXC4-202ENST00000466963 KRTAP5-1Q6L8H4 278 aa1.65□□□□□ -2.14
CXXC4-202ENST00000466963 SERP2Q8N6R1 65 aa1.65□□□□□ -2.14
CXXC4-202ENST00000466963 LCE3EQ5T5B0 92 aa1.64□□□□□ -2.15
CXXC4-202ENST00000466963 A0A1B0GU69 56 aa1.64□□□□□ -2.15
CXXC4-202ENST00000466963 SPATA8Q6RVD6 105 aa1.62□□□□□ -2.15
CXXC4-202ENST00000466963 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
CXXC4-202ENST00000466963 K7ERS5 55 aa1.6□□□□□ -2.15
CXXC4-202ENST00000466963 OBSCNQ5VST9 7968 aa1.6□□□□□ -2.15
CXXC4-202ENST00000466963 KRTAP6-2Q3LI66 62 aa1.6□□□□□ -2.15
CXXC4-202ENST00000466963 SYNE1Q8NF91 8797 aaKnown RBP1.58□□□□□ -2.16
CXXC4-202ENST00000466963 LOC105371267A0A1B0GV96 52 aa1.57□□□□□ -2.16
CXXC4-202ENST00000466963 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
CXXC4-202ENST00000466963 ATP5EP56381 51 aaPredicted RBP1.56□□□□□ -2.16
CXXC4-202ENST00000466963 SNURFQ9Y675 71 aa1.53□□□□□ -2.16
CXXC4-202ENST00000466963 UQCR11O14957 56 aa1.53□□□□□ -2.17
CXXC4-202ENST00000466963 LCE1CQ5T751 118 aa1.51□□□□□ -2.17
CXXC4-202ENST00000466963 LCE1BQ5T7P3 118 aa1.51□□□□□ -2.17
CXXC4-202ENST00000466963 K7ERU9 68 aa1.51□□□□□ -2.17
CXXC4-202ENST00000466963 LINC01558Q9Y6Z2 57 aa1.5□□□□□ -2.17
CXXC4-202ENST00000466963 A8MU10 97 aa1.49□□□□□ -2.17
CXXC4-202ENST00000466963 RPS28P62857 69 aaKnown RBP1.49□□□□□ -2.17
CXXC4-202ENST00000466963 COX7CP15954 63 aa1.46□□□□□ -2.17
CXXC4-202ENST00000466963 V9GYY9 64 aa1.46□□□□□ -2.17
CXXC4-202ENST00000466963 A0A1B0GV90 55 aa1.41□□□□□ -2.18
CXXC4-202ENST00000466963 MIR22HGQ0VDD5 57 aa1.4□□□□□ -2.19
CXXC4-202ENST00000466963 PRO0628Q9UI54 55 aa1.4□□□□□ -2.19
CXXC4-202ENST00000466963 CDC42SE1Q9NRR8 79 aa1.38□□□□□ -2.19
CXXC4-202ENST00000466963 PSPHP1O15172 72 aa1.35□□□□□ -2.19
CXXC4-202ENST00000466963 LCE3DQ9BYE3 92 aa1.34□□□□□ -2.19
CXXC4-202ENST00000466963 Q1T7F1 81 aa1.33□□□□□ -2.2
CXXC4-202ENST00000466963 ROMO1P60602 79 aa1.32□□□□□ -2.2
CXXC4-202ENST00000466963 PMAIP1Q13794 54 aa1.31□□□□□ -2.2
CXXC4-202ENST00000466963 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
CXXC4-202ENST00000466963 TMEM258P61165 79 aa1.27□□□□□ -2.21
CXXC4-202ENST00000466963 KTN1-AS1Q86SY8 53 aa1.24□□□□□ -2.21
CXXC4-202ENST00000466963 ANAPC13Q9BS18 74 aa1.2□□□□□ -2.22
CXXC4-202ENST00000466963 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
CXXC4-202ENST00000466963 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
CXXC4-202ENST00000466963 A6NED7 52 aa1.13□□□□□ -2.23
CXXC4-202ENST00000466963 CCDC179H3BU77 68 aa1.13□□□□□ -2.23
CXXC4-202ENST00000466963 LUZP6Q538Z0 58 aa1.12□□□□□ -2.23
CXXC4-202ENST00000466963 KRTAP21-2Q3LI59 83 aa1.11□□□□□ -2.23
CXXC4-202ENST00000466963 BRK1Q8WUW1 75 aa1.1□□□□□ -2.23
CXXC4-202ENST00000466963 INE1O15225 51 aa0.97□□□□□ -2.25
CXXC4-202ENST00000466963 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
CXXC4-202ENST00000466963 PRM1P04553 51 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 62.9 ms