RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 UQCR11O14957 56 aa5.78□□□□□ -1.48
SDHB-203ENST00000466613 LCE1DQ5T752 114 aa5.78□□□□□ -1.48
SDHB-203ENST00000466613 LCE4AQ5TA78 99 aa5.78□□□□□ -1.48
SDHB-203ENST00000466613 KRTAP4-3Q9BYR4 195 aa5.76□□□□□ -1.49
SDHB-203ENST00000466613 MT4P47944 62 aa5.71□□□□□ -1.5
SDHB-203ENST00000466613 HMCN1Q96RW7 5635 aa5.7□□□□□ -1.5
SDHB-203ENST00000466613 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
SDHB-203ENST00000466613 KRTAP5-4Q6L8H1 288 aa5.67□□□□□ -1.5
SDHB-203ENST00000466613 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
SDHB-203ENST00000466613 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
SDHB-203ENST00000466613 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.51
SDHB-203ENST00000466613 K7ERS5 55 aa5.55□□□□□ -1.52
SDHB-203ENST00000466613 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
SDHB-203ENST00000466613 V9GYY9 64 aa5.52□□□□□ -1.53
SDHB-203ENST00000466613 PSPHP1O15172 72 aa5.5□□□□□ -1.53
SDHB-203ENST00000466613 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
SDHB-203ENST00000466613 Q1T7F1 81 aa5.48□□□□□ -1.53
SDHB-203ENST00000466613 KRTAP5-5Q701N2 237 aaPredicted RBP5.43□□□□□ -1.54
SDHB-203ENST00000466613 KRTAP5-10Q6L8G5 202 aa5.4□□□□□ -1.54
SDHB-203ENST00000466613 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
SDHB-203ENST00000466613 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
SDHB-203ENST00000466613 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
SDHB-203ENST00000466613 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
SDHB-203ENST00000466613 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
SDHB-203ENST00000466613 A6NED7 52 aa5.32□□□□□ -1.56
SDHB-203ENST00000466613 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
SDHB-203ENST00000466613 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
SDHB-203ENST00000466613 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
SDHB-203ENST00000466613 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
SDHB-203ENST00000466613 CDC42SE1Q9NRR8 79 aa5.25□□□□□ -1.57
SDHB-203ENST00000466613 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
SDHB-203ENST00000466613 KRTAP5-7Q6L8G8 165 aa5.19□□□□□ -1.58
SDHB-203ENST00000466613 ROMO1P60602 79 aa5.16□□□□□ -1.58
SDHB-203ENST00000466613 RPS28P62857 69 aaKnown RBP5.12□□□□□ -1.59
SDHB-203ENST00000466613 MT1AP04731 61 aa5.04□□□□□ -1.6
SDHB-203ENST00000466613 KRTAP6-1Q3LI64 71 aa5.01□□□□□ -1.61
SDHB-203ENST00000466613 KRTAP5-2Q701N4 177 aa4.96□□□□□ -1.62
SDHB-203ENST00000466613 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
SDHB-203ENST00000466613 PCP4P48539 62 aa4.95□□□□□ -1.62
SDHB-203ENST00000466613 SVIPQ8NHG7 77 aa4.95□□□□□ -1.62
SDHB-203ENST00000466613 KRTAP4-11Q9BYQ6 195 aa4.89□□□□□ -1.63
SDHB-203ENST00000466613 KRTAP9-4Q9BYQ2 154 aa4.88□□□□□ -1.63
SDHB-203ENST00000466613 KRTAP6-2Q3LI66 62 aa4.79□□□□□ -1.64
SDHB-203ENST00000466613 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
SDHB-203ENST00000466613 H3BS24 57 aa4.72□□□□□ -1.65
SDHB-203ENST00000466613 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
SDHB-203ENST00000466613 MT3P25713 68 aa4.61□□□□□ -1.67
SDHB-203ENST00000466613 MUC5BQ9HC84 5762 aaPredicted RBP4.53□□□□□ -1.68
SDHB-203ENST00000466613 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
SDHB-203ENST00000466613 AHNAKQ09666 5890 aaKnown RBP4.49□□□□□ -1.69
SDHB-203ENST00000466613 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
SDHB-203ENST00000466613 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
SDHB-203ENST00000466613 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
SDHB-203ENST00000466613 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
SDHB-203ENST00000466613 PMAIP1Q13794 54 aa4.19□□□□□ -1.74
SDHB-203ENST00000466613 PRAC1Q96KF2 57 aa4.07□□□□□ -1.76
SDHB-203ENST00000466613 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
SDHB-203ENST00000466613 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
SDHB-203ENST00000466613 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
SDHB-203ENST00000466613 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
SDHB-203ENST00000466613 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
SDHB-203ENST00000466613 PRO0628Q9UI54 55 aa3.78□□□□□ -1.8
SDHB-203ENST00000466613 LCE3DQ9BYE3 92 aa3.77□□□□□ -1.81
SDHB-203ENST00000466613 KTN1-AS1Q86SY8 53 aa3.68□□□□□ -1.82
SDHB-203ENST00000466613 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
SDHB-203ENST00000466613 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
SDHB-203ENST00000466613 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
SDHB-203ENST00000466613 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SDHB-203ENST00000466613 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
SDHB-203ENST00000466613 KRTAP21-2Q3LI59 83 aa3.31□□□□□ -1.88
SDHB-203ENST00000466613 PHGR1C9JFL3 82 aa3.14□□□□□ -1.91
SDHB-203ENST00000466613 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
SDHB-203ENST00000466613 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
SDHB-203ENST00000466613 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
SDHB-203ENST00000466613 PRM1P04553 51 aa2.64□□□□□ -1.99
SDHB-203ENST00000466613 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
SDHB-203ENST00000466613 INE1O15225 51 aa2.11□□□□□ -2.07
SDHB-203ENST00000466613 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 53.3 ms