RNA–Protein interactions for RNA: ENST00000466490.6

SRPRB-201, Transcript of SRP receptor subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRPRB, Length 2,827 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-201ENST00000466490 MT1LQ93083 61 aa4.52□□□□□ -1.69
SRPRB-201ENST00000466490 MT1EP04732 61 aa4.46□□□□□ -1.69
SRPRB-201ENST00000466490 MACF1Q9UPN3 7388 aaKnown RBP4.43□□□□□ -1.7
SRPRB-201ENST00000466490 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
SRPRB-201ENST00000466490 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
SRPRB-201ENST00000466490 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
SRPRB-201ENST00000466490 CRCT1Q9UGL9 99 aa4.4□□□□□ -1.7
SRPRB-201ENST00000466490 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
SRPRB-201ENST00000466490 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
SRPRB-201ENST00000466490 MUC12Q9UKN1 5478 aa4.28□□□□□ -1.72
SRPRB-201ENST00000466490 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
SRPRB-201ENST00000466490 MT1GP13640 62 aa4.23□□□□□ -1.73
SRPRB-201ENST00000466490 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.22□□□□□ -1.73
SRPRB-201ENST00000466490 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
SRPRB-201ENST00000466490 MDN1Q9NU22 5596 aa4.21□□□□□ -1.74
SRPRB-201ENST00000466490 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
SRPRB-201ENST00000466490 MT1MQ8N339 61 aa4.14□□□□□ -1.75
SRPRB-201ENST00000466490 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
SRPRB-201ENST00000466490 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
SRPRB-201ENST00000466490 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
SRPRB-201ENST00000466490 MT1AP04731 61 aa4.02□□□□□ -1.77
SRPRB-201ENST00000466490 LCE3BQ5TA77 95 aa4.02□□□□□ -1.77
SRPRB-201ENST00000466490 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
SRPRB-201ENST00000466490 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
SRPRB-201ENST00000466490 KRTAP9-9Q9BYP9 154 aa3.99□□□□□ -1.77
SRPRB-201ENST00000466490 KRTAP9-4Q9BYQ2 154 aa3.99□□□□□ -1.77
SRPRB-201ENST00000466490 KRTAP4-9Q9BYQ8 210 aa3.97□□□□□ -1.77
SRPRB-201ENST00000466490 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
SRPRB-201ENST00000466490 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
SRPRB-201ENST00000466490 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
SRPRB-201ENST00000466490 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
SRPRB-201ENST00000466490 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
SRPRB-201ENST00000466490 KRTAP5-5Q701N2 237 aaPredicted RBP3.88□□□□□ -1.79
SRPRB-201ENST00000466490 PRM1P04553 51 aa3.87□□□□□ -1.79
SRPRB-201ENST00000466490 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
SRPRB-201ENST00000466490 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
SRPRB-201ENST00000466490 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
SRPRB-201ENST00000466490 SPRR2EP22531 72 aa3.74□□□□□ -1.81
SRPRB-201ENST00000466490 SPRR2BP35325 72 aa3.74□□□□□ -1.81
SRPRB-201ENST00000466490 SPRR2AP35326 72 aa3.74□□□□□ -1.81
SRPRB-201ENST00000466490 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
SRPRB-201ENST00000466490 NEBP20929 6669 aa3.73□□□□□ -1.81
SRPRB-201ENST00000466490 LCE1DQ5T752 114 aa3.69□□□□□ -1.82
SRPRB-201ENST00000466490 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.82
SRPRB-201ENST00000466490 SPRR2DP22532 72 aa3.58□□□□□ -1.84
SRPRB-201ENST00000466490 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
SRPRB-201ENST00000466490 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
SRPRB-201ENST00000466490 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
SRPRB-201ENST00000466490 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
SRPRB-201ENST00000466490 MT3P25713 68 aa3.39□□□□□ -1.87
SRPRB-201ENST00000466490 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
SRPRB-201ENST00000466490 MT4P47944 62 aa3.26□□□□□ -1.89
SRPRB-201ENST00000466490 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
SRPRB-201ENST00000466490 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
SRPRB-201ENST00000466490 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
SRPRB-201ENST00000466490 KRTAP5-3Q6L8H2 238 aa2.95□□□□□ -1.94
SRPRB-201ENST00000466490 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
SRPRB-201ENST00000466490 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
SRPRB-201ENST00000466490 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
SRPRB-201ENST00000466490 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
SRPRB-201ENST00000466490 KRTAP5-10Q6L8G5 202 aa2.82□□□□□ -1.96
SRPRB-201ENST00000466490 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
SRPRB-201ENST00000466490 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
SRPRB-201ENST00000466490 KRTAP5-1Q6L8H4 278 aa2.73□□□□□ -1.97
SRPRB-201ENST00000466490 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
SRPRB-201ENST00000466490 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
SRPRB-201ENST00000466490 KRTAP5-8O75690 187 aa2.55□□□□□ -2
SRPRB-201ENST00000466490 LCE1CQ5T751 118 aa2.54□□□□□ -2
SRPRB-201ENST00000466490 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
SRPRB-201ENST00000466490 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.01
SRPRB-201ENST00000466490 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.01
SRPRB-201ENST00000466490 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
SRPRB-201ENST00000466490 KRTAP5-7Q6L8G8 165 aa2.41□□□□□ -2.02
SRPRB-201ENST00000466490 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
SRPRB-201ENST00000466490 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
SRPRB-201ENST00000466490 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
SRPRB-201ENST00000466490 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 121.2 ms