RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
VPS16-206ENST00000466415 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
VPS16-206ENST00000466415 MACF1Q9UPN3 7388 aaKnown RBP4.46□□□□□ -1.7
VPS16-206ENST00000466415 MT1EP04732 61 aa4.44□□□□□ -1.7
VPS16-206ENST00000466415 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
VPS16-206ENST00000466415 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
VPS16-206ENST00000466415 KRTAP6-3Q3LI67 103 aa4.42□□□□□ -1.7
VPS16-206ENST00000466415 KRTAP5-9P26371 169 aa4.41□□□□□ -1.7
VPS16-206ENST00000466415 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
VPS16-206ENST00000466415 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
VPS16-206ENST00000466415 MT1LQ93083 61 aa4.33□□□□□ -1.72
VPS16-206ENST00000466415 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
VPS16-206ENST00000466415 SPRR2EP22531 72 aa4.29□□□□□ -1.72
VPS16-206ENST00000466415 SPRR2BP35325 72 aa4.29□□□□□ -1.72
VPS16-206ENST00000466415 SPRR2AP35326 72 aa4.29□□□□□ -1.72
VPS16-206ENST00000466415 SYNE2Q8WXH0 6885 aaKnown RBP4.29□□□□□ -1.72
VPS16-206ENST00000466415 KRTAP19-4Q3LI73 84 aa4.26□□□□□ -1.73
VPS16-206ENST00000466415 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
VPS16-206ENST00000466415 MT1GP13640 62 aa4.25□□□□□ -1.73
VPS16-206ENST00000466415 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
VPS16-206ENST00000466415 KRTAP4-11Q9BYQ6 195 aa4.23□□□□□ -1.73
VPS16-206ENST00000466415 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
VPS16-206ENST00000466415 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
VPS16-206ENST00000466415 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
VPS16-206ENST00000466415 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
VPS16-206ENST00000466415 MT1MQ8N339 61 aa4.19□□□□□ -1.74
VPS16-206ENST00000466415 MDN1Q9NU22 5596 aa4.15□□□□□ -1.74
VPS16-206ENST00000466415 SPRR2DP22532 72 aa4.14□□□□□ -1.75
VPS16-206ENST00000466415 NDUFAF8A1L188 74 aa4.09□□□□□ -1.75
VPS16-206ENST00000466415 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
VPS16-206ENST00000466415 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
VPS16-206ENST00000466415 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
VPS16-206ENST00000466415 NEBP20929 6669 aa4□□□□□ -1.77
VPS16-206ENST00000466415 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
VPS16-206ENST00000466415 KRTAP9-6A8MVA2 160 aa3.92□□□□□ -1.78
VPS16-206ENST00000466415 KRTAP2-3P0C7H8 128 aa3.9□□□□□ -1.79
VPS16-206ENST00000466415 KRTAP2-4Q9BYR9 128 aa3.9□□□□□ -1.79
VPS16-206ENST00000466415 KRTAP20-1Q3LI63 56 aa3.89□□□□□ -1.79
VPS16-206ENST00000466415 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
VPS16-206ENST00000466415 KRTAP2-1Q9BYU5 128 aa3.81□□□□□ -1.8
VPS16-206ENST00000466415 DSTQ03001 7570 aaKnown RBP3.78□□□□□ -1.8
VPS16-206ENST00000466415 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
VPS16-206ENST00000466415 MT1AP04731 61 aa3.7□□□□□ -1.82
VPS16-206ENST00000466415 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.83
VPS16-206ENST00000466415 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
VPS16-206ENST00000466415 INE1O15225 51 aa3.62□□□□□ -1.83
VPS16-206ENST00000466415 KRTAP12-4P60329 112 aa3.59□□□□□ -1.83
VPS16-206ENST00000466415 MT4P47944 62 aa3.58□□□□□ -1.84
VPS16-206ENST00000466415 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
VPS16-206ENST00000466415 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
VPS16-206ENST00000466415 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
VPS16-206ENST00000466415 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
VPS16-206ENST00000466415 MT3P25713 68 aa3.37□□□□□ -1.87
VPS16-206ENST00000466415 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.88
VPS16-206ENST00000466415 KRTAP5-2Q701N4 177 aa3.29□□□□□ -1.88
VPS16-206ENST00000466415 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.91
VPS16-206ENST00000466415 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
VPS16-206ENST00000466415 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
VPS16-206ENST00000466415 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.02□□□□□ -1.93
VPS16-206ENST00000466415 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
VPS16-206ENST00000466415 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
VPS16-206ENST00000466415 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
VPS16-206ENST00000466415 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
VPS16-206ENST00000466415 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
VPS16-206ENST00000466415 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
VPS16-206ENST00000466415 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
VPS16-206ENST00000466415 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
VPS16-206ENST00000466415 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
VPS16-206ENST00000466415 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
VPS16-206ENST00000466415 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
VPS16-206ENST00000466415 PRM1P04553 51 aa2.61□□□□□ -1.99
VPS16-206ENST00000466415 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
VPS16-206ENST00000466415 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
VPS16-206ENST00000466415 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
VPS16-206ENST00000466415 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
VPS16-206ENST00000466415 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
VPS16-206ENST00000466415 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
VPS16-206ENST00000466415 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 117.5 ms