RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
UBE4B-206ENST00000466379 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
UBE4B-206ENST00000466379 FCGBPQ9Y6R7 5405 aaPredicted RBP4.91□□□□□ -1.62
UBE4B-206ENST00000466379 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.62
UBE4B-206ENST00000466379 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
UBE4B-206ENST00000466379 MT1EP04732 61 aa4.85□□□□□ -1.63
UBE4B-206ENST00000466379 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
UBE4B-206ENST00000466379 MT1LQ93083 61 aa4.79□□□□□ -1.64
UBE4B-206ENST00000466379 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
UBE4B-206ENST00000466379 LCE1DQ5T752 114 aa4.72□□□□□ -1.65
UBE4B-206ENST00000466379 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
UBE4B-206ENST00000466379 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
UBE4B-206ENST00000466379 MUC12Q9UKN1 5478 aa4.69□□□□□ -1.66
UBE4B-206ENST00000466379 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
UBE4B-206ENST00000466379 CRCT1Q9UGL9 99 aa4.66□□□□□ -1.66
UBE4B-206ENST00000466379 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
UBE4B-206ENST00000466379 KRTAP5-3Q6L8H2 238 aa4.65□□□□□ -1.66
UBE4B-206ENST00000466379 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
UBE4B-206ENST00000466379 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
UBE4B-206ENST00000466379 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
UBE4B-206ENST00000466379 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.68
UBE4B-206ENST00000466379 KRTAP2-2Q9BYT5 123 aa4.57□□□□□ -1.68
UBE4B-206ENST00000466379 MT1MQ8N339 61 aa4.55□□□□□ -1.68
UBE4B-206ENST00000466379 MT1GP13640 62 aa4.54□□□□□ -1.68
UBE4B-206ENST00000466379 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
UBE4B-206ENST00000466379 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
UBE4B-206ENST00000466379 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
UBE4B-206ENST00000466379 MDN1Q9NU22 5596 aa4.39□□□□□ -1.71
UBE4B-206ENST00000466379 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
UBE4B-206ENST00000466379 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
UBE4B-206ENST00000466379 DSTQ03001 7570 aaKnown RBP4.36□□□□□ -1.71
UBE4B-206ENST00000466379 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
UBE4B-206ENST00000466379 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
UBE4B-206ENST00000466379 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
UBE4B-206ENST00000466379 SPRR2EP22531 72 aa4.32□□□□□ -1.72
UBE4B-206ENST00000466379 SPRR2BP35325 72 aa4.32□□□□□ -1.72
UBE4B-206ENST00000466379 SPRR2AP35326 72 aa4.32□□□□□ -1.72
UBE4B-206ENST00000466379 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
UBE4B-206ENST00000466379 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
UBE4B-206ENST00000466379 SPRR2DP22532 72 aa4.15□□□□□ -1.75
UBE4B-206ENST00000466379 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
UBE4B-206ENST00000466379 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
UBE4B-206ENST00000466379 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
UBE4B-206ENST00000466379 MT1AP04731 61 aa4.02□□□□□ -1.77
UBE4B-206ENST00000466379 MT3P25713 68 aa4.01□□□□□ -1.77
UBE4B-206ENST00000466379 NEBP20929 6669 aa3.98□□□□□ -1.77
UBE4B-206ENST00000466379 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
UBE4B-206ENST00000466379 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
UBE4B-206ENST00000466379 KRTAP12-4P60329 112 aa3.75□□□□□ -1.81
UBE4B-206ENST00000466379 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
UBE4B-206ENST00000466379 KRTAP6-2Q3LI66 62 aa3.7□□□□□ -1.82
UBE4B-206ENST00000466379 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
UBE4B-206ENST00000466379 MT4P47944 62 aa3.65□□□□□ -1.82
UBE4B-206ENST00000466379 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
UBE4B-206ENST00000466379 KRTAP20-2Q3LI61 65 aa3.53□□□□□ -1.84
UBE4B-206ENST00000466379 HMCN1Q96RW7 5635 aa3.5□□□□□ -1.85
UBE4B-206ENST00000466379 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
UBE4B-206ENST00000466379 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
UBE4B-206ENST00000466379 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
UBE4B-206ENST00000466379 PRM1P04553 51 aa3.29□□□□□ -1.88
UBE4B-206ENST00000466379 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
UBE4B-206ENST00000466379 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
UBE4B-206ENST00000466379 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.93
UBE4B-206ENST00000466379 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
UBE4B-206ENST00000466379 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
UBE4B-206ENST00000466379 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
UBE4B-206ENST00000466379 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
UBE4B-206ENST00000466379 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
UBE4B-206ENST00000466379 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
UBE4B-206ENST00000466379 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
UBE4B-206ENST00000466379 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
UBE4B-206ENST00000466379 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
UBE4B-206ENST00000466379 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
UBE4B-206ENST00000466379 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
UBE4B-206ENST00000466379 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
UBE4B-206ENST00000466379 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
UBE4B-206ENST00000466379 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
UBE4B-206ENST00000466379 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 97.7 ms