RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 SMIM6P0DI80 62 aa1.85□□□□□ -2.11
NCL-208ENST00000466274 H3BT86 120 aa1.84□□□□□ -2.11
NCL-208ENST00000466274 SYNE1Q8NF91 8797 aaKnown RBP1.83□□□□□ -2.12
NCL-208ENST00000466274 SPCS1Q9Y6A9 102 aa1.83□□□□□ -2.12
NCL-208ENST00000466274 KRTAP13-4Q3LI77 160 aa1.82□□□□□ -2.12
NCL-208ENST00000466274 SMIM26A0A096LP01 95 aa1.79□□□□□ -2.12
NCL-208ENST00000466274 ATOX1O00244 68 aa1.79□□□□□ -2.12
NCL-208ENST00000466274 UBL5Q9BZL1 73 aa1.79□□□□□ -2.12
NCL-208ENST00000466274 LOC105371267A0A1B0GV96 52 aa1.78□□□□□ -2.12
NCL-208ENST00000466274 H0Y9P7 68 aa1.78□□□□□ -2.12
NCL-208ENST00000466274 TAX1BP3O14907 124 aa1.78□□□□□ -2.12
NCL-208ENST00000466274 SPANXA2-OT1Q8N9U9 137 aa1.78□□□□□ -2.12
NCL-208ENST00000466274 C10orf95Q9H7T3 257 aa1.78□□□□□ -2.12
NCL-208ENST00000466274 COL5A1-AS1Q5SY13 56 aa1.77□□□□□ -2.13
NCL-208ENST00000466274 DMAC1Q96GE9 116 aa1.75□□□□□ -2.13
NCL-208ENST00000466274 PSPHP1O15172 72 aa1.74□□□□□ -2.13
NCL-208ENST00000466274 GTF2H5Q6ZYL4 71 aa1.74□□□□□ -2.13
NCL-208ENST00000466274 UQCRQO14949 82 aa1.73□□□□□ -2.13
NCL-208ENST00000466274 SPINT4Q6UDR6 99 aa1.73□□□□□ -2.13
NCL-208ENST00000466274 SPTSSBQ8NFR3 76 aa1.72□□□□□ -2.13
NCL-208ENST00000466274 LINC00208Q96KT6 92 aa1.72□□□□□ -2.13
NCL-208ENST00000466274 ETDBQ3ZM63 59 aa1.71□□□□□ -2.14
NCL-208ENST00000466274 HIST1H4AP62805 103 aaKnown RBP1.7□□□□□ -2.14
NCL-208ENST00000466274 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
NCL-208ENST00000466274 F8W1H4 67 aa1.69□□□□□ -2.14
NCL-208ENST00000466274 MT1AP04731 61 aa1.68□□□□□ -2.14
NCL-208ENST00000466274 KRTAP12-3P60328 96 aa1.68□□□□□ -2.14
NCL-208ENST00000466274 LUZP6Q538Z0 58 aa1.68□□□□□ -2.14
NCL-208ENST00000466274 KRTAP6-1Q3LI64 71 aa1.67□□□□□ -2.14
NCL-208ENST00000466274 TRAV7A0A075B6U4 112 aa1.66□□□□□ -2.14
NCL-208ENST00000466274 A0A1B0GV90 55 aa1.65□□□□□ -2.15
NCL-208ENST00000466274 TNP1P09430 55 aa1.65□□□□□ -2.15
NCL-208ENST00000466274 ATP5EP2Q5VTU8 51 aa1.65□□□□□ -2.15
NCL-208ENST00000466274 FAM240AA0A1B0GVK7 77 aa1.64□□□□□ -2.15
NCL-208ENST00000466274 V9GYY9 64 aa1.64□□□□□ -2.15
NCL-208ENST00000466274 SCGB1A1P11684 91 aa1.63□□□□□ -2.15
NCL-208ENST00000466274 MP68P56378 58 aa1.63□□□□□ -2.15
NCL-208ENST00000466274 PRO0628Q9UI54 55 aa1.63□□□□□ -2.15
NCL-208ENST00000466274 J3QR89 54 aa1.62□□□□□ -2.15
NCL-208ENST00000466274 KRTAP12-1P59990 96 aa1.62□□□□□ -2.15
NCL-208ENST00000466274 LINC00643Q86TS7 51 aa1.62□□□□□ -2.15
NCL-208ENST00000466274 ACYP2P14621 99 aa1.6□□□□□ -2.15
NCL-208ENST00000466274 CHKB-CPT1BH3BT56 60 aa1.58□□□□□ -2.16
NCL-208ENST00000466274 SPATA8Q6RVD6 105 aa1.58□□□□□ -2.16
NCL-208ENST00000466274 H3BPC8 53 aa1.56□□□□□ -2.16
NCL-208ENST00000466274 K7ERU9 68 aa1.55□□□□□ -2.16
NCL-208ENST00000466274 KRTAP25-1Q3LHN0 102 aa1.55□□□□□ -2.16
NCL-208ENST00000466274 SNURFQ9Y675 71 aa1.53□□□□□ -2.16
NCL-208ENST00000466274 SMIM20Q8N5G0 67 aa1.52□□□□□ -2.17
NCL-208ENST00000466274 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
NCL-208ENST00000466274 K7ERS5 55 aa1.51□□□□□ -2.17
NCL-208ENST00000466274 ANAPC13Q9BS18 74 aa1.5□□□□□ -2.17
NCL-208ENST00000466274 SERP1Q9Y6X1 66 aa1.48□□□□□ -2.17
NCL-208ENST00000466274 A0A1B0GU33 70 aa1.47□□□□□ -2.17
NCL-208ENST00000466274 SERP2Q8N6R1 65 aa1.47□□□□□ -2.17
NCL-208ENST00000466274 COA5Q86WW8 74 aa1.45□□□□□ -2.18
NCL-208ENST00000466274 A6NED7 52 aa1.42□□□□□ -2.18
NCL-208ENST00000466274 COX7CP15954 63 aa1.42□□□□□ -2.18
NCL-208ENST00000466274 A0A1B0GU69 56 aa1.4□□□□□ -2.19
NCL-208ENST00000466274 H7BZZ5 65 aa1.39□□□□□ -2.19
NCL-208ENST00000466274 CCDC179H3BU77 68 aa1.38□□□□□ -2.19
NCL-208ENST00000466274 PRR15LQ9BU68 103 aa1.37□□□□□ -2.19
NCL-208ENST00000466274 ATP5EP56381 51 aaPredicted RBP1.34□□□□□ -2.19
NCL-208ENST00000466274 TMEM258P61165 79 aa1.31□□□□□ -2.2
NCL-208ENST00000466274 UQCR11O14957 56 aa1.29□□□□□ -2.2
NCL-208ENST00000466274 LINC01558Q9Y6Z2 57 aa1.29□□□□□ -2.2
NCL-208ENST00000466274 MIR22HGQ0VDD5 57 aa1.28□□□□□ -2.2
NCL-208ENST00000466274 Q1T7F1 81 aa1.2□□□□□ -2.22
NCL-208ENST00000466274 CDC42SE1Q9NRR8 79 aa1.2□□□□□ -2.22
NCL-208ENST00000466274 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
NCL-208ENST00000466274 RPS28P62857 69 aaKnown RBP1.17□□□□□ -2.22
NCL-208ENST00000466274 ROMO1P60602 79 aa1.16□□□□□ -2.22
NCL-208ENST00000466274 BRK1Q8WUW1 75 aa1.11□□□□□ -2.23
NCL-208ENST00000466274 KTN1-AS1Q86SY8 53 aa1.06□□□□□ -2.24
NCL-208ENST00000466274 PMAIP1Q13794 54 aa1.05□□□□□ -2.24
NCL-208ENST00000466274 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
NCL-208ENST00000466274 INE1O15225 51 aa0.77□□□□□ -2.29
NCL-208ENST00000466274 PRM1P04553 51 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 5.5 ms