RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 MT1EP04732 61 aa4.42□□□□□ -1.7
ARHGEF3-204ENST00000465659 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
ARHGEF3-204ENST00000465659 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
ARHGEF3-204ENST00000465659 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
ARHGEF3-204ENST00000465659 CRCT1Q9UGL9 99 aa4.3□□□□□ -1.72
ARHGEF3-204ENST00000465659 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
ARHGEF3-204ENST00000465659 FCGBPQ9Y6R7 5405 aaPredicted RBP4.23□□□□□ -1.73
ARHGEF3-204ENST00000465659 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.73
ARHGEF3-204ENST00000465659 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
ARHGEF3-204ENST00000465659 MT1GP13640 62 aa4.12□□□□□ -1.75
ARHGEF3-204ENST00000465659 MT1MQ8N339 61 aa4.12□□□□□ -1.75
ARHGEF3-204ENST00000465659 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
ARHGEF3-204ENST00000465659 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
ARHGEF3-204ENST00000465659 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
ARHGEF3-204ENST00000465659 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.03□□□□□ -1.76
ARHGEF3-204ENST00000465659 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
ARHGEF3-204ENST00000465659 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
ARHGEF3-204ENST00000465659 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.78
ARHGEF3-204ENST00000465659 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
ARHGEF3-204ENST00000465659 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
ARHGEF3-204ENST00000465659 MDN1Q9NU22 5596 aa3.84□□□□□ -1.8
ARHGEF3-204ENST00000465659 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
ARHGEF3-204ENST00000465659 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
ARHGEF3-204ENST00000465659 MT1AP04731 61 aa3.78□□□□□ -1.8
ARHGEF3-204ENST00000465659 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
ARHGEF3-204ENST00000465659 KRTAP4-9Q9BYQ8 210 aa3.75□□□□□ -1.81
ARHGEF3-204ENST00000465659 KRTAP6-1Q3LI64 71 aa3.73□□□□□ -1.81
ARHGEF3-204ENST00000465659 KRTAP6-3Q3LI67 103 aa3.68□□□□□ -1.82
ARHGEF3-204ENST00000465659 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
ARHGEF3-204ENST00000465659 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
ARHGEF3-204ENST00000465659 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
ARHGEF3-204ENST00000465659 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
ARHGEF3-204ENST00000465659 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
ARHGEF3-204ENST00000465659 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
ARHGEF3-204ENST00000465659 NEBP20929 6669 aa3.58□□□□□ -1.84
ARHGEF3-204ENST00000465659 SPRR2EP22531 72 aa3.54□□□□□ -1.84
ARHGEF3-204ENST00000465659 SPRR2BP35325 72 aa3.54□□□□□ -1.84
ARHGEF3-204ENST00000465659 SPRR2AP35326 72 aa3.54□□□□□ -1.84
ARHGEF3-204ENST00000465659 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
ARHGEF3-204ENST00000465659 PRM1P04553 51 aa3.4□□□□□ -1.86
ARHGEF3-204ENST00000465659 SPRR2DP22532 72 aa3.39□□□□□ -1.87
ARHGEF3-204ENST00000465659 MT3P25713 68 aa3.34□□□□□ -1.87
ARHGEF3-204ENST00000465659 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
ARHGEF3-204ENST00000465659 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
ARHGEF3-204ENST00000465659 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
ARHGEF3-204ENST00000465659 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
ARHGEF3-204ENST00000465659 KRTAP4-6Q9BYQ5 205 aa3.09□□□□□ -1.91
ARHGEF3-204ENST00000465659 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
ARHGEF3-204ENST00000465659 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
ARHGEF3-204ENST00000465659 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
ARHGEF3-204ENST00000465659 MT4P47944 62 aa2.95□□□□□ -1.94
ARHGEF3-204ENST00000465659 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
ARHGEF3-204ENST00000465659 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
ARHGEF3-204ENST00000465659 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
ARHGEF3-204ENST00000465659 KRTAP5-10Q6L8G5 202 aa2.82□□□□□ -1.96
ARHGEF3-204ENST00000465659 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
ARHGEF3-204ENST00000465659 AHNAK2Q8IVF2 5795 aa2.8□□□□□ -1.96
ARHGEF3-204ENST00000465659 LCE1DQ5T752 114 aa2.8□□□□□ -1.96
ARHGEF3-204ENST00000465659 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
ARHGEF3-204ENST00000465659 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
ARHGEF3-204ENST00000465659 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
ARHGEF3-204ENST00000465659 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.98
ARHGEF3-204ENST00000465659 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
ARHGEF3-204ENST00000465659 LCE1CQ5T751 118 aa2.6□□□□□ -1.99
ARHGEF3-204ENST00000465659 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -2
ARHGEF3-204ENST00000465659 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
ARHGEF3-204ENST00000465659 KRTAP4-11Q9BYQ6 195 aa2.55□□□□□ -2
ARHGEF3-204ENST00000465659 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
ARHGEF3-204ENST00000465659 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
ARHGEF3-204ENST00000465659 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
ARHGEF3-204ENST00000465659 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
ARHGEF3-204ENST00000465659 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
ARHGEF3-204ENST00000465659 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
ARHGEF3-204ENST00000465659 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
ARHGEF3-204ENST00000465659 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
ARHGEF3-204ENST00000465659 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
ARHGEF3-204ENST00000465659 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
ARHGEF3-204ENST00000465659 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 117.6 ms