RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 KRTAP4-3Q9BYR4 195 aa7.3□□□□□ -1.24
CSPG5-204ENST00000465441 HMCN1Q96RW7 5635 aa7.29□□□□□ -1.24
CSPG5-204ENST00000465441 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
CSPG5-204ENST00000465441 C10orf95Q9H7T3 257 aa7.28□□□□□ -1.24
CSPG5-204ENST00000465441 KRTAP5-4Q6L8H1 288 aa7.23□□□□□ -1.25
CSPG5-204ENST00000465441 TNP1P09430 55 aa7.22□□□□□ -1.25
CSPG5-204ENST00000465441 UQCR11O14957 56 aa7.21□□□□□ -1.26
CSPG5-204ENST00000465441 KRTAP4-6Q9BYQ5 205 aa7.16□□□□□ -1.26
CSPG5-204ENST00000465441 AHNAK2Q8IVF2 5795 aa7.12□□□□□ -1.27
CSPG5-204ENST00000465441 KRTAP5-10Q6L8G5 202 aa7.07□□□□□ -1.28
CSPG5-204ENST00000465441 KRTAP4-7Q9BYR0 210 aa7.07□□□□□ -1.28
CSPG5-204ENST00000465441 V9GYY9 64 aa7.06□□□□□ -1.28
CSPG5-204ENST00000465441 MIR22HGQ0VDD5 57 aa7.04□□□□□ -1.28
CSPG5-204ENST00000465441 Q1T7F1 81 aa7.03□□□□□ -1.28
CSPG5-204ENST00000465441 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
CSPG5-204ENST00000465441 PSPHP1O15172 72 aa6.97□□□□□ -1.29
CSPG5-204ENST00000465441 K7ERS5 55 aa6.88□□□□□ -1.31
CSPG5-204ENST00000465441 KRTAP5-3Q6L8H2 238 aa6.87□□□□□ -1.31
CSPG5-204ENST00000465441 KRTAP20-2Q3LI61 65 aa6.84□□□□□ -1.31
CSPG5-204ENST00000465441 KRTAP25-1Q3LHN0 102 aa6.83□□□□□ -1.32
CSPG5-204ENST00000465441 KRTAP5-7Q6L8G8 165 aa6.83□□□□□ -1.32
CSPG5-204ENST00000465441 KRTAP5-5Q701N2 237 aaPredicted RBP6.83□□□□□ -1.32
CSPG5-204ENST00000465441 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
CSPG5-204ENST00000465441 SPRR5A0A1B0GTR4 108 aa6.77□□□□□ -1.33
CSPG5-204ENST00000465441 PCP4P48539 62 aa6.77□□□□□ -1.33
CSPG5-204ENST00000465441 A6NED7 52 aa6.76□□□□□ -1.33
CSPG5-204ENST00000465441 KRTAP12-4P60329 112 aa6.72□□□□□ -1.33
CSPG5-204ENST00000465441 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
CSPG5-204ENST00000465441 SYNE1Q8NF91 8797 aaKnown RBP6.66□□□□□ -1.34
CSPG5-204ENST00000465441 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
CSPG5-204ENST00000465441 KRTAP19-4Q3LI73 84 aa6.57□□□□□ -1.36
CSPG5-204ENST00000465441 CDC42SE1Q9NRR8 79 aa6.55□□□□□ -1.36
CSPG5-204ENST00000465441 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
CSPG5-204ENST00000465441 ROMO1P60602 79 aa6.45□□□□□ -1.38
CSPG5-204ENST00000465441 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
CSPG5-204ENST00000465441 KRTAP4-11Q9BYQ6 195 aa6.31□□□□□ -1.4
CSPG5-204ENST00000465441 MT1AP04731 61 aa6.29□□□□□ -1.4
CSPG5-204ENST00000465441 KRTAP6-1Q3LI64 71 aa6.29□□□□□ -1.4
CSPG5-204ENST00000465441 KRTAP5-2Q701N4 177 aa6.28□□□□□ -1.4
CSPG5-204ENST00000465441 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
CSPG5-204ENST00000465441 KRTAP5-8O75690 187 aa6.11□□□□□ -1.43
CSPG5-204ENST00000465441 KRTAP9-6A8MVA2 160 aa6.08□□□□□ -1.44
CSPG5-204ENST00000465441 KRTAP6-2Q3LI66 62 aa6.04□□□□□ -1.44
CSPG5-204ENST00000465441 BRK1Q8WUW1 75 aa5.93□□□□□ -1.46
CSPG5-204ENST00000465441 OBSCNQ5VST9 7968 aa5.92□□□□□ -1.46
CSPG5-204ENST00000465441 MUC5BQ9HC84 5762 aaPredicted RBP5.89□□□□□ -1.47
CSPG5-204ENST00000465441 AHNAKQ09666 5890 aaKnown RBP5.86□□□□□ -1.47
CSPG5-204ENST00000465441 MUC5ACP98088 5654 aa5.84□□□□□ -1.47
CSPG5-204ENST00000465441 KRTAP9-9Q9BYP9 154 aa5.83□□□□□ -1.48
CSPG5-204ENST00000465441 MT3P25713 68 aa5.77□□□□□ -1.49
CSPG5-204ENST00000465441 KRTAP5-1Q6L8H4 278 aa5.7□□□□□ -1.5
CSPG5-204ENST00000465441 PMAIP1Q13794 54 aa5.57□□□□□ -1.52
CSPG5-204ENST00000465441 LCE1EQ5T753 118 aa5.35□□□□□ -1.55
CSPG5-204ENST00000465441 PRAC1Q96KF2 57 aa5.34□□□□□ -1.55
CSPG5-204ENST00000465441 PRO0628Q9UI54 55 aa5.28□□□□□ -1.56
CSPG5-204ENST00000465441 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
CSPG5-204ENST00000465441 LCE1BQ5T7P3 118 aa5.08□□□□□ -1.6
CSPG5-204ENST00000465441 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
CSPG5-204ENST00000465441 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
CSPG5-204ENST00000465441 SVIPQ8NHG7 77 aa4.78□□□□□ -1.64
CSPG5-204ENST00000465441 KRTAP4-12Q9BQ66 201 aa4.73□□□□□ -1.65
CSPG5-204ENST00000465441 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
CSPG5-204ENST00000465441 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
CSPG5-204ENST00000465441 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
CSPG5-204ENST00000465441 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
CSPG5-204ENST00000465441 LCE1FQ5T754 118 aa4.45□□□□□ -1.7
CSPG5-204ENST00000465441 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
CSPG5-204ENST00000465441 KRTAP21-2Q3LI59 83 aa4.14□□□□□ -1.75
CSPG5-204ENST00000465441 PHGR1C9JFL3 82 aa4.13□□□□□ -1.75
CSPG5-204ENST00000465441 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
CSPG5-204ENST00000465441 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
CSPG5-204ENST00000465441 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
CSPG5-204ENST00000465441 H3BS24 57 aa3.51□□□□□ -1.85
CSPG5-204ENST00000465441 PRM1P04553 51 aa3.3□□□□□ -1.88
CSPG5-204ENST00000465441 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
CSPG5-204ENST00000465441 INE1O15225 51 aa3□□□□□ -1.93
CSPG5-204ENST00000465441 A0A0A0MQY5 61 aa2.93□□□□□ -1.94
CSPG5-204ENST00000465441 MUC16Q8WXI7 14507 aa2.59□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 59.3 ms