RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 KRTAP5-10Q6L8G5 202 aa7.86□□□□□ -1.15
USP42-205ENST00000465073 TNP1P09430 55 aa7.83□□□□□ -1.16
USP42-205ENST00000465073 A0A1B0GU69 56 aa7.79□□□□□ -1.16
USP42-205ENST00000465073 A8MU10 97 aa7.78□□□□□ -1.16
USP42-205ENST00000465073 COX7CP15954 63 aa7.75□□□□□ -1.17
USP42-205ENST00000465073 H7BZZ5 65 aa7.74□□□□□ -1.17
USP42-205ENST00000465073 KRTAP23-1A1A580 65 aa7.69□□□□□ -1.18
USP42-205ENST00000465073 KRTAP19-4Q3LI73 84 aa7.68□□□□□ -1.18
USP42-205ENST00000465073 KRTAP4-7Q9BYR0 210 aa7.64□□□□□ -1.19
USP42-205ENST00000465073 KRTAP5-7Q6L8G8 165 aa7.62□□□□□ -1.19
USP42-205ENST00000465073 KRTAP12-3P60328 96 aa7.6□□□□□ -1.19
USP42-205ENST00000465073 KRTAP5-3Q6L8H2 238 aa7.6□□□□□ -1.19
USP42-205ENST00000465073 KRTAP20-2Q3LI61 65 aa7.53□□□□□ -1.2
USP42-205ENST00000465073 SPRR5A0A1B0GTR4 108 aa7.49□□□□□ -1.21
USP42-205ENST00000465073 KRTAP5-5Q701N2 237 aaPredicted RBP7.49□□□□□ -1.21
USP42-205ENST00000465073 PRR15LQ9BU68 103 aa7.45□□□□□ -1.22
USP42-205ENST00000465073 KRTAP12-4P60329 112 aa7.42□□□□□ -1.22
USP42-205ENST00000465073 KRTAP4-12Q9BQ66 201 aa7.29□□□□□ -1.24
USP42-205ENST00000465073 LINC01558Q9Y6Z2 57 aa7.27□□□□□ -1.25
USP42-205ENST00000465073 ANAPC13Q9BS18 74 aa7.26□□□□□ -1.25
USP42-205ENST00000465073 PCP4P48539 62 aa7.24□□□□□ -1.25
USP42-205ENST00000465073 KRTAP25-1Q3LHN0 102 aa7.22□□□□□ -1.25
USP42-205ENST00000465073 ATP5EP56381 51 aaPredicted RBP7.2□□□□□ -1.26
USP42-205ENST00000465073 UQCR11O14957 56 aa7.18□□□□□ -1.26
USP42-205ENST00000465073 SYNE1Q8NF91 8797 aaKnown RBP7.12□□□□□ -1.27
USP42-205ENST00000465073 CCDC179H3BU77 68 aa7.11□□□□□ -1.27
USP42-205ENST00000465073 KRTAP15-1Q3LI76 137 aa6.99□□□□□ -1.29
USP42-205ENST00000465073 MIR22HGQ0VDD5 57 aa6.98□□□□□ -1.29
USP42-205ENST00000465073 KRTAP4-11Q9BYQ6 195 aa6.98□□□□□ -1.29
USP42-205ENST00000465073 LCE3CQ5T5A8 94 aa6.97□□□□□ -1.29
USP42-205ENST00000465073 K7ERS5 55 aa6.95□□□□□ -1.3
USP42-205ENST00000465073 A0A0A0MQY5 61 aa6.93□□□□□ -1.3
USP42-205ENST00000465073 KRTAP9-9Q9BYP9 154 aa6.93□□□□□ -1.3
USP42-205ENST00000465073 KRTAP9-4Q9BYQ2 154 aa6.93□□□□□ -1.3
USP42-205ENST00000465073 KRTAP5-2Q701N4 177 aa6.92□□□□□ -1.3
USP42-205ENST00000465073 MT1AP04731 61 aa6.86□□□□□ -1.31
USP42-205ENST00000465073 TMEM258P61165 79 aa6.85□□□□□ -1.31
USP42-205ENST00000465073 KRTAP6-1Q3LI64 71 aa6.84□□□□□ -1.31
USP42-205ENST00000465073 KRTAP5-8O75690 187 aa6.73□□□□□ -1.33
USP42-205ENST00000465073 AHNAKQ09666 5890 aaKnown RBP6.65□□□□□ -1.34
USP42-205ENST00000465073 MUC5ACP98088 5654 aa6.65□□□□□ -1.34
USP42-205ENST00000465073 PSPHP1O15172 72 aa6.62□□□□□ -1.35
USP42-205ENST00000465073 KRTAP6-2Q3LI66 62 aa6.6□□□□□ -1.35
USP42-205ENST00000465073 V9GYY9 64 aa6.6□□□□□ -1.35
USP42-205ENST00000465073 MUC5BQ9HC84 5762 aaPredicted RBP6.59□□□□□ -1.36
USP42-205ENST00000465073 KRTAP9-6A8MVA2 160 aa6.55□□□□□ -1.36
USP42-205ENST00000465073 Q1T7F1 81 aa6.52□□□□□ -1.37
USP42-205ENST00000465073 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
USP42-205ENST00000465073 RPS28P62857 69 aaKnown RBP6.49□□□□□ -1.37
USP42-205ENST00000465073 OBSCNQ5VST9 7968 aa6.48□□□□□ -1.37
USP42-205ENST00000465073 A6NED7 52 aa6.38□□□□□ -1.39
USP42-205ENST00000465073 ROMO1P60602 79 aa6.38□□□□□ -1.39
USP42-205ENST00000465073 MT3P25713 68 aa6.32□□□□□ -1.4
USP42-205ENST00000465073 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
USP42-205ENST00000465073 KRTAP5-1Q6L8H4 278 aa6.26□□□□□ -1.41
USP42-205ENST00000465073 LCE1EQ5T753 118 aa5.9□□□□□ -1.47
USP42-205ENST00000465073 PRAC1Q96KF2 57 aa5.71□□□□□ -1.49
USP42-205ENST00000465073 LCE1BQ5T7P3 118 aa5.55□□□□□ -1.52
USP42-205ENST00000465073 LCE1CQ5T751 118 aa5.46□□□□□ -1.53
USP42-205ENST00000465073 NDUFAF8A1L188 74 aa5.32□□□□□ -1.56
USP42-205ENST00000465073 BRK1Q8WUW1 75 aa4.99□□□□□ -1.61
USP42-205ENST00000465073 KRTAP5-11Q6L8G4 156 aa4.97□□□□□ -1.61
USP42-205ENST00000465073 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
USP42-205ENST00000465073 LCE1FQ5T754 118 aa4.94□□□□□ -1.62
USP42-205ENST00000465073 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.93□□□□□ -1.62
USP42-205ENST00000465073 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
USP42-205ENST00000465073 LCE3EQ5T5B0 92 aa4.6□□□□□ -1.67
USP42-205ENST00000465073 PHGR1C9JFL3 82 aa4.59□□□□□ -1.67
USP42-205ENST00000465073 KRTAP21-2Q3LI59 83 aa4.51□□□□□ -1.69
USP42-205ENST00000465073 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
USP42-205ENST00000465073 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
USP42-205ENST00000465073 MUC19Q7Z5P9 8384 aa4□□□□□ -1.77
USP42-205ENST00000465073 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
USP42-205ENST00000465073 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.8
USP42-205ENST00000465073 KRTAP21-1Q3LI58 79 aa3.52□□□□□ -1.85
USP42-205ENST00000465073 PRM1P04553 51 aa3.22□□□□□ -1.89
USP42-205ENST00000465073 MUC16Q8WXI7 14507 aa2.88□□□□□ -1.95
USP42-205ENST00000465073 INE1O15225 51 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 124.5 ms