RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 KRTAP9-3Q9BYQ3 159 aa1.47□□□□□ -2.17
CCNL1-204ENST00000464316 KRTAP19-8Q3LI54 63 aa1.47□□□□□ -2.17
CCNL1-204ENST00000464316 UBR4Q5T4S7 5183 aa1.46□□□□□ -2.18
CCNL1-204ENST00000464316 LCE3CQ5T5A8 94 aa1.46□□□□□ -2.18
CCNL1-204ENST00000464316 MT2AP02795 61 aa1.43□□□□□ -2.18
CCNL1-204ENST00000464316 KRTAP10-5P60370 271 aa1.43□□□□□ -2.18
CCNL1-204ENST00000464316 MT1XP80297 61 aa1.43□□□□□ -2.18
CCNL1-204ENST00000464316 KRTAP5-2Q701N4 177 aa1.43□□□□□ -2.18
CCNL1-204ENST00000464316 USH2AO75445 5202 aa1.42□□□□□ -2.18
CCNL1-204ENST00000464316 MT1FP04733 61 aa1.42□□□□□ -2.18
CCNL1-204ENST00000464316 RNF213Q63HN8 5207 aa1.41□□□□□ -2.18
CCNL1-204ENST00000464316 MT1HP80294 61 aa1.41□□□□□ -2.18
CCNL1-204ENST00000464316 KRTAP20-1Q3LI63 56 aa1.41□□□□□ -2.18
CCNL1-204ENST00000464316 MT1BP07438 61 aa1.4□□□□□ -2.18
CCNL1-204ENST00000464316 KRTAP6-3Q3LI67 103 aa1.4□□□□□ -2.18
CCNL1-204ENST00000464316 SSPOA2VEC9 5147 aa1.4□□□□□ -2.19
CCNL1-204ENST00000464316 KRTAP19-5Q3LI72 72 aa1.4□□□□□ -2.19
CCNL1-204ENST00000464316 KRTAP10-7P60409 375 aaPredicted RBP1.39□□□□□ -2.19
CCNL1-204ENST00000464316 KRTAP2-3P0C7H8 128 aa1.38□□□□□ -2.19
CCNL1-204ENST00000464316 KRTAP2-4Q9BYR9 128 aa1.38□□□□□ -2.19
CCNL1-204ENST00000464316 KRTAP2-1Q9BYU5 128 aa1.38□□□□□ -2.19
CCNL1-204ENST00000464316 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
CCNL1-204ENST00000464316 KRTAP5-7Q6L8G8 165 aa1.32□□□□□ -2.2
CCNL1-204ENST00000464316 LCE1AQ5T7P2 110 aa1.32□□□□□ -2.2
CCNL1-204ENST00000464316 KRTAP9-6A8MVA2 160 aa1.31□□□□□ -2.2
CCNL1-204ENST00000464316 KRTAP12-4P60329 112 aa1.31□□□□□ -2.2
CCNL1-204ENST00000464316 KRTAP4-4Q9BYR3 166 aa1.29□□□□□ -2.2
CCNL1-204ENST00000464316 KRTAP5-11Q6L8G4 156 aa1.28□□□□□ -2.21
CCNL1-204ENST00000464316 NEBP20929 6669 aa1.28□□□□□ -2.21
CCNL1-204ENST00000464316 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
CCNL1-204ENST00000464316 MT1LQ93083 61 aa1.27□□□□□ -2.21
CCNL1-204ENST00000464316 KRTAP19-7Q3SYF9 63 aa1.26□□□□□ -2.21
CCNL1-204ENST00000464316 MUC2Q02817 5179 aa1.26□□□□□ -2.21
CCNL1-204ENST00000464316 MT1EP04732 61 aa1.25□□□□□ -2.21
CCNL1-204ENST00000464316 KRTAP2-2Q9BYT5 123 aa1.24□□□□□ -2.21
CCNL1-204ENST00000464316 KRTAP19-6Q3LI70 58 aa1.23□□□□□ -2.21
CCNL1-204ENST00000464316 MT1GP13640 62 aa1.2□□□□□ -2.22
CCNL1-204ENST00000464316 KRTAP5-1Q6L8H4 278 aa1.2□□□□□ -2.22
CCNL1-204ENST00000464316 OBSCNQ5VST9 7968 aa1.19□□□□□ -2.22
CCNL1-204ENST00000464316 LCE3EQ5T5B0 92 aa1.19□□□□□ -2.22
CCNL1-204ENST00000464316 LCE3DQ9BYE3 92 aa1.19□□□□□ -2.22
CCNL1-204ENST00000464316 MT1AP04731 61 aa1.18□□□□□ -2.22
CCNL1-204ENST00000464316 KRTAP19-3Q7Z4W3 81 aa1.16□□□□□ -2.22
CCNL1-204ENST00000464316 MT1MQ8N339 61 aa1.16□□□□□ -2.22
CCNL1-204ENST00000464316 PRM1P04553 51 aa1.15□□□□□ -2.23
CCNL1-204ENST00000464316 KRTAP4-3Q9BYR4 195 aa1.13□□□□□ -2.23
CCNL1-204ENST00000464316 KRTAP5-5Q701N2 237 aaPredicted RBP1.11□□□□□ -2.23
CCNL1-204ENST00000464316 SYNE1Q8NF91 8797 aaKnown RBP1.11□□□□□ -2.23
CCNL1-204ENST00000464316 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
CCNL1-204ENST00000464316 LCE1EQ5T753 118 aa1.1□□□□□ -2.23
CCNL1-204ENST00000464316 LCE1FQ5T754 118 aa1.08□□□□□ -2.24
CCNL1-204ENST00000464316 SPRR2FQ96RM1 72 aa1.08□□□□□ -2.24
CCNL1-204ENST00000464316 KMT2DO14686 5537 aa1.07□□□□□ -2.24
CCNL1-204ENST00000464316 MUC12Q9UKN1 5478 aa1.07□□□□□ -2.24
CCNL1-204ENST00000464316 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
CCNL1-204ENST00000464316 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
CCNL1-204ENST00000464316 FCGBPQ9Y6R7 5405 aaPredicted RBP1.04□□□□□ -2.24
CCNL1-204ENST00000464316 SPRR2AP35326 72 aa1.04□□□□□ -2.24
CCNL1-204ENST00000464316 MT3P25713 68 aa1.02□□□□□ -2.25
CCNL1-204ENST00000464316 AHNAK2Q8IVF2 5795 aa1□□□□□ -2.25
CCNL1-204ENST00000464316 SPRR2EP22531 72 aa0.99□□□□□ -2.25
CCNL1-204ENST00000464316 SPRR2BP35325 72 aa0.99□□□□□ -2.25
CCNL1-204ENST00000464316 MUC19Q7Z5P9 8384 aa0.97□□□□□ -2.25
CCNL1-204ENST00000464316 DSTQ03001 7570 aaKnown RBP0.96□□□□□ -2.26
CCNL1-204ENST00000464316 SPRR2DP22532 72 aa0.96□□□□□ -2.26
CCNL1-204ENST00000464316 SYNE2Q8WXH0 6885 aaKnown RBP0.93□□□□□ -2.26
CCNL1-204ENST00000464316 MUC5ACP98088 5654 aa0.92□□□□□ -2.26
CCNL1-204ENST00000464316 MDN1Q9NU22 5596 aa0.9□□□□□ -2.26
CCNL1-204ENST00000464316 FSIP2Q5CZC0 6907 aa0.9□□□□□ -2.27
CCNL1-204ENST00000464316 MACF1Q9UPN3 7388 aaKnown RBP0.83□□□□□ -2.28
CCNL1-204ENST00000464316 LCE1BQ5T7P3 118 aa0.8□□□□□ -2.28
CCNL1-204ENST00000464316 MT4P47944 62 aa0.77□□□□□ -2.29
CCNL1-204ENST00000464316 KRTAP20-2Q3LI61 65 aa0.77□□□□□ -2.29
CCNL1-204ENST00000464316 LCE1CQ5T751 118 aa0.73□□□□□ -2.29
CCNL1-204ENST00000464316 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
CCNL1-204ENST00000464316 KRTAP21-2Q3LI59 83 aa0.66□□□□□ -2.3
CCNL1-204ENST00000464316 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
CCNL1-204ENST00000464316 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 13.5 ms