RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
SNRNP40-203ENST00000463988 MT1MQ8N339 61 aa5.11□□□□□ -1.59
SNRNP40-203ENST00000463988 MT1LQ93083 61 aa5.11□□□□□ -1.59
SNRNP40-203ENST00000463988 A0A1B0GU69 56 aa5.1□□□□□ -1.59
SNRNP40-203ENST00000463988 KRTAP4-11Q9BYQ6 195 aa5.1□□□□□ -1.59
SNRNP40-203ENST00000463988 HMCN1Q96RW7 5635 aa5.06□□□□□ -1.6
SNRNP40-203ENST00000463988 A8MU10 97 aa5.04□□□□□ -1.6
SNRNP40-203ENST00000463988 TNP1P09430 55 aa5.04□□□□□ -1.6
SNRNP40-203ENST00000463988 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
SNRNP40-203ENST00000463988 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
SNRNP40-203ENST00000463988 MT4P47944 62 aa5.01□□□□□ -1.61
SNRNP40-203ENST00000463988 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
SNRNP40-203ENST00000463988 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
SNRNP40-203ENST00000463988 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
SNRNP40-203ENST00000463988 ANAPC13Q9BS18 74 aa4.91□□□□□ -1.62
SNRNP40-203ENST00000463988 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
SNRNP40-203ENST00000463988 A0A0A0MQY5 61 aa4.87□□□□□ -1.63
SNRNP40-203ENST00000463988 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
SNRNP40-203ENST00000463988 ATP5EP56381 51 aaPredicted RBP4.86□□□□□ -1.63
SNRNP40-203ENST00000463988 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
SNRNP40-203ENST00000463988 LINC01558Q9Y6Z2 57 aa4.84□□□□□ -1.63
SNRNP40-203ENST00000463988 KRTAP5-10Q6L8G5 202 aa4.82□□□□□ -1.64
SNRNP40-203ENST00000463988 CCDC179H3BU77 68 aa4.81□□□□□ -1.64
SNRNP40-203ENST00000463988 UQCR11O14957 56 aa4.75□□□□□ -1.65
SNRNP40-203ENST00000463988 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-203ENST00000463988 KRTAP25-1Q3LHN0 102 aa4.7□□□□□ -1.66
SNRNP40-203ENST00000463988 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
SNRNP40-203ENST00000463988 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
SNRNP40-203ENST00000463988 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
SNRNP40-203ENST00000463988 KRTAP5-7Q6L8G8 165 aa4.67□□□□□ -1.66
SNRNP40-203ENST00000463988 TMEM258P61165 79 aa4.65□□□□□ -1.67
SNRNP40-203ENST00000463988 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
SNRNP40-203ENST00000463988 MIR22HGQ0VDD5 57 aa4.61□□□□□ -1.67
SNRNP40-203ENST00000463988 K7ERS5 55 aa4.58□□□□□ -1.68
SNRNP40-203ENST00000463988 SYNE1Q8NF91 8797 aaKnown RBP4.52□□□□□ -1.69
SNRNP40-203ENST00000463988 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
SNRNP40-203ENST00000463988 V9GYY9 64 aa4.46□□□□□ -1.7
SNRNP40-203ENST00000463988 PSPHP1O15172 72 aa4.42□□□□□ -1.7
SNRNP40-203ENST00000463988 Q1T7F1 81 aa4.41□□□□□ -1.7
SNRNP40-203ENST00000463988 MT1AP04731 61 aa4.35□□□□□ -1.71
SNRNP40-203ENST00000463988 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
SNRNP40-203ENST00000463988 KRTAP6-1Q3LI64 71 aa4.31□□□□□ -1.72
SNRNP40-203ENST00000463988 CDC42SE1Q9NRR8 79 aa4.3□□□□□ -1.72
SNRNP40-203ENST00000463988 A6NED7 52 aa4.27□□□□□ -1.73
SNRNP40-203ENST00000463988 ROMO1P60602 79 aa4.23□□□□□ -1.73
SNRNP40-203ENST00000463988 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-203ENST00000463988 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
SNRNP40-203ENST00000463988 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
SNRNP40-203ENST00000463988 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
SNRNP40-203ENST00000463988 MUC5BQ9HC84 5762 aaPredicted RBP4.09□□□□□ -1.75
SNRNP40-203ENST00000463988 AHNAKQ09666 5890 aaKnown RBP4.09□□□□□ -1.76
SNRNP40-203ENST00000463988 OBSCNQ5VST9 7968 aa4.07□□□□□ -1.76
SNRNP40-203ENST00000463988 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
SNRNP40-203ENST00000463988 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
SNRNP40-203ENST00000463988 MT3P25713 68 aa4□□□□□ -1.77
SNRNP40-203ENST00000463988 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
SNRNP40-203ENST00000463988 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
SNRNP40-203ENST00000463988 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
SNRNP40-203ENST00000463988 PRO0628Q9UI54 55 aa3.62□□□□□ -1.83
SNRNP40-203ENST00000463988 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
SNRNP40-203ENST00000463988 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
SNRNP40-203ENST00000463988 BRK1Q8WUW1 75 aa3.46□□□□□ -1.86
SNRNP40-203ENST00000463988 LCE1CQ5T751 118 aa3.45□□□□□ -1.86
SNRNP40-203ENST00000463988 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
SNRNP40-203ENST00000463988 PMAIP1Q13794 54 aa3.4□□□□□ -1.87
SNRNP40-203ENST00000463988 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
SNRNP40-203ENST00000463988 KTN1-AS1Q86SY8 53 aa3.28□□□□□ -1.88
SNRNP40-203ENST00000463988 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
SNRNP40-203ENST00000463988 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
SNRNP40-203ENST00000463988 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
SNRNP40-203ENST00000463988 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
SNRNP40-203ENST00000463988 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
SNRNP40-203ENST00000463988 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
SNRNP40-203ENST00000463988 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
SNRNP40-203ENST00000463988 INE1O15225 51 aa2.29□□□□□ -2.04
SNRNP40-203ENST00000463988 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
SNRNP40-203ENST00000463988 PRM1P04553 51 aa2.13□□□□□ -2.07
SNRNP40-203ENST00000463988 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 115.4 ms