RNA–Protein interactions for RNA: ENST00000463948.1

EGFR-209, Transcript of epidermal growth factor receptor, humanhuman

TSL 3

Gene EGFR, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-209ENST00000463948 KRTAP9-4Q9BYQ2 154 aa6.94□□□□□ -1.3
EGFR-209ENST00000463948 RPS28P62857 69 aaKnown RBP6.91□□□□□ -1.3
EGFR-209ENST00000463948 PSPHP1O15172 72 aa6.9□□□□□ -1.3
EGFR-209ENST00000463948 MIR22HGQ0VDD5 57 aa6.86□□□□□ -1.31
EGFR-209ENST00000463948 LCE1DQ5T752 114 aa6.86□□□□□ -1.31
EGFR-209ENST00000463948 H3BS24 57 aa6.83□□□□□ -1.32
EGFR-209ENST00000463948 KRTAP19-5Q3LI72 72 aa6.83□□□□□ -1.32
EGFR-209ENST00000463948 MT1GP13640 62 aa6.81□□□□□ -1.32
EGFR-209ENST00000463948 MT4P47944 62 aa6.79□□□□□ -1.32
EGFR-209ENST00000463948 HMCN1Q96RW7 5635 aa6.76□□□□□ -1.33
EGFR-209ENST00000463948 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
EGFR-209ENST00000463948 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
EGFR-209ENST00000463948 LCE4AQ5TA78 99 aa6.72□□□□□ -1.33
EGFR-209ENST00000463948 MT1MQ8N339 61 aa6.71□□□□□ -1.34
EGFR-209ENST00000463948 A6NED7 52 aa6.69□□□□□ -1.34
EGFR-209ENST00000463948 K7ERS5 55 aa6.67□□□□□ -1.34
EGFR-209ENST00000463948 TNP1P09430 55 aa6.67□□□□□ -1.34
EGFR-209ENST00000463948 MT1LQ93083 61 aa6.65□□□□□ -1.34
EGFR-209ENST00000463948 AHNAK2Q8IVF2 5795 aa6.65□□□□□ -1.35
EGFR-209ENST00000463948 KRTAP4-3Q9BYR4 195 aa6.64□□□□□ -1.35
EGFR-209ENST00000463948 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
EGFR-209ENST00000463948 KRTAP4-7Q9BYR0 210 aa6.57□□□□□ -1.36
EGFR-209ENST00000463948 KRTAP5-4Q6L8H1 288 aa6.54□□□□□ -1.36
EGFR-209ENST00000463948 LCE3AQ5TA76 89 aa6.53□□□□□ -1.36
EGFR-209ENST00000463948 KRTAP5-10Q6L8G5 202 aa6.51□□□□□ -1.37
EGFR-209ENST00000463948 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
EGFR-209ENST00000463948 CDC42SE1Q9NRR8 79 aa6.46□□□□□ -1.38
EGFR-209ENST00000463948 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
EGFR-209ENST00000463948 KRTAP5-3Q6L8H2 238 aa6.3□□□□□ -1.4
EGFR-209ENST00000463948 ROMO1P60602 79 aa6.29□□□□□ -1.4
EGFR-209ENST00000463948 KRTAP5-7Q6L8G8 165 aa6.28□□□□□ -1.4
EGFR-209ENST00000463948 KRTAP4-2Q9BYR5 136 aa6.28□□□□□ -1.4
EGFR-209ENST00000463948 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
EGFR-209ENST00000463948 KRTAP4-11Q9BYQ6 195 aa6.23□□□□□ -1.41
EGFR-209ENST00000463948 KRTAP20-2Q3LI61 65 aa6.22□□□□□ -1.41
EGFR-209ENST00000463948 KRTAP5-5Q701N2 237 aaPredicted RBP6.14□□□□□ -1.43
EGFR-209ENST00000463948 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
EGFR-209ENST00000463948 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
EGFR-209ENST00000463948 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
EGFR-209ENST00000463948 SYNE1Q8NF91 8797 aaKnown RBP6.02□□□□□ -1.45
EGFR-209ENST00000463948 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
EGFR-209ENST00000463948 LCE3CQ5T5A8 94 aa5.83□□□□□ -1.48
EGFR-209ENST00000463948 PMAIP1Q13794 54 aa5.75□□□□□ -1.49
EGFR-209ENST00000463948 KRTAP6-1Q3LI64 71 aa5.67□□□□□ -1.5
EGFR-209ENST00000463948 KRTAP5-2Q701N4 177 aa5.66□□□□□ -1.5
EGFR-209ENST00000463948 MT1AP04731 61 aa5.64□□□□□ -1.51
EGFR-209ENST00000463948 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
EGFR-209ENST00000463948 KRTAP5-8O75690 187 aa5.57□□□□□ -1.52
EGFR-209ENST00000463948 AHNAKQ09666 5890 aaKnown RBP5.55□□□□□ -1.52
EGFR-209ENST00000463948 MUC5ACP98088 5654 aa5.51□□□□□ -1.53
EGFR-209ENST00000463948 KRTAP9-6A8MVA2 160 aa5.49□□□□□ -1.53
EGFR-209ENST00000463948 KRTAP6-2Q3LI66 62 aa5.49□□□□□ -1.53
EGFR-209ENST00000463948 MUC5BQ9HC84 5762 aaPredicted RBP5.49□□□□□ -1.53
EGFR-209ENST00000463948 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
EGFR-209ENST00000463948 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
EGFR-209ENST00000463948 KTN1-AS1Q86SY8 53 aa5.28□□□□□ -1.56
EGFR-209ENST00000463948 MT3P25713 68 aa5.18□□□□□ -1.58
EGFR-209ENST00000463948 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
EGFR-209ENST00000463948 SVIPQ8NHG7 77 aa5□□□□□ -1.61
EGFR-209ENST00000463948 LCE1EQ5T753 118 aa4.79□□□□□ -1.64
EGFR-209ENST00000463948 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.67
EGFR-209ENST00000463948 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
EGFR-209ENST00000463948 LCE1CQ5T751 118 aa4.46□□□□□ -1.7
EGFR-209ENST00000463948 LCE3DQ9BYE3 92 aa4.27□□□□□ -1.73
EGFR-209ENST00000463948 KRTAP5-11Q6L8G4 156 aa4.2□□□□□ -1.74
EGFR-209ENST00000463948 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
EGFR-209ENST00000463948 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
EGFR-209ENST00000463948 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
EGFR-209ENST00000463948 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
EGFR-209ENST00000463948 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
EGFR-209ENST00000463948 PHGR1C9JFL3 82 aa3.83□□□□□ -1.8
EGFR-209ENST00000463948 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
EGFR-209ENST00000463948 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
EGFR-209ENST00000463948 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
EGFR-209ENST00000463948 INE1O15225 51 aa3.24□□□□□ -1.89
EGFR-209ENST00000463948 PRM1P04553 51 aa3.22□□□□□ -1.89
EGFR-209ENST00000463948 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
EGFR-209ENST00000463948 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 72.9 ms