RNA–Protein interactions for RNA: ENST00000463675.5

SNU13-205, Transcript of small nuclear ribonucleoprotein 13, human

TSL 3

Gene SNU13, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNU13-205	ENST00000463675	LCE5A	Q5TCM9	118 aa		5.53	□□□□□ -1.52
SNU13-205	ENST00000463675	PCP4	P48539	62 aa		5.51	□□□□□ -1.53
SNU13-205	ENST00000463675		K7ERS5	55 aa		5.44	□□□□□ -1.54
SNU13-205	ENST00000463675	MT1L	Q93083	61 aa		5.43	□□□□□ -1.54
SNU13-205	ENST00000463675		A6NED7	52 aa		5.42	□□□□□ -1.54
SNU13-205	ENST00000463675	DST	Q03001	7570 aa	Known RBP	5.4	□□□□□ -1.54
SNU13-205	ENST00000463675	MT1G	P13640	62 aa		5.4	□□□□□ -1.54
SNU13-205	ENST00000463675	MT1M	Q8N339	61 aa		5.38	□□□□□ -1.55
SNU13-205	ENST00000463675	PP632	Q6XCG6	107 aa		5.36	□□□□□ -1.55
SNU13-205	ENST00000463675	RPS28	P62857	69 aa	Known RBP	5.34	□□□□□ -1.55
SNU13-205	ENST00000463675	KRTAP25-1	Q3LHN0	102 aa		5.34	□□□□□ -1.55
SNU13-205	ENST00000463675	KRTAP12-3	P60328	96 aa		5.33	□□□□□ -1.56
SNU13-205	ENST00000463675	KRTAP4-12	Q9BQ66	201 aa		5.33	□□□□□ -1.56
SNU13-205	ENST00000463675	KRTAP4-3	Q9BYR4	195 aa		5.29	□□□□□ -1.56
SNU13-205	ENST00000463675	KRTAP19-4	Q3LI73	84 aa		5.24	□□□□□ -1.57
SNU13-205	ENST00000463675	KRTAP4-7	Q9BYR0	210 aa		5.22	□□□□□ -1.57
SNU13-205	ENST00000463675	CDC42SE1	Q9NRR8	79 aa		5.2	□□□□□ -1.58
SNU13-205	ENST00000463675	KRTAP4-9	Q9BYQ8	210 aa		5.19	□□□□□ -1.58
SNU13-205	ENST00000463675	ROMO1	P60602	79 aa		5.12	□□□□□ -1.59
SNU13-205	ENST00000463675	KRTAP9-9	Q9BYP9	154 aa		5.08	□□□□□ -1.6
SNU13-205	ENST00000463675	KRTAP9-4	Q9BYQ2	154 aa		5.08	□□□□□ -1.6
SNU13-205	ENST00000463675	KRTAP23-1	A1A580	65 aa		5.07	□□□□□ -1.6
SNU13-205	ENST00000463675	LCE1D	Q5T752	114 aa		5.07	□□□□□ -1.6
SNU13-205	ENST00000463675	LCE4A	Q5TA78	99 aa		5.07	□□□□□ -1.6
SNU13-205	ENST00000463675	MT4	P47944	62 aa		5.06	□□□□□ -1.6
SNU13-205	ENST00000463675	HMCN1	Q96RW7	5635 aa		5.04	□□□□□ -1.6
SNU13-205	ENST00000463675	KRTAP15-1	Q3LI76	137 aa		5.01	□□□□□ -1.61
SNU13-205	ENST00000463675	GPR98	Q8WXG9	6306 aa		5	□□□□□ -1.61
SNU13-205	ENST00000463675	KRTAP5-4	Q6L8H1	288 aa		4.99	□□□□□ -1.61
SNU13-205	ENST00000463675	LCE3C	Q5T5A8	94 aa		4.91	□□□□□ -1.62
SNU13-205	ENST00000463675	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.89	□□□□□ -1.63
SNU13-205	ENST00000463675	AHNAK2	Q8IVF2	5795 aa		4.84	□□□□□ -1.64
SNU13-205	ENST00000463675	BRK1	Q8WUW1	75 aa		4.83	□□□□□ -1.64
SNU13-205	ENST00000463675	SYNE1	Q8NF91	8797 aa	Known RBP	4.76	□□□□□ -1.65
SNU13-205	ENST00000463675	KRTAP20-2	Q3LI61	65 aa		4.73	□□□□□ -1.65
SNU13-205	ENST00000463675	KRTAP12-4	P60329	112 aa		4.7	□□□□□ -1.66
SNU13-205	ENST00000463675	KRTAP9-6	A8MVA2	160 aa		4.68	□□□□□ -1.66
SNU13-205	ENST00000463675	SPRR5	A0A1B0GTR4	108 aa		4.67	□□□□□ -1.66
SNU13-205	ENST00000463675	MT1A	P04731	61 aa		4.61	□□□□□ -1.67
SNU13-205	ENST00000463675	KRTAP5-10	Q6L8G5	202 aa		4.61	□□□□□ -1.67
SNU13-205	ENST00000463675	KRTAP6-1	Q3LI64	71 aa		4.6	□□□□□ -1.67
SNU13-205	ENST00000463675	KRTAP4-11	Q9BYQ6	195 aa		4.58	□□□□□ -1.68
SNU13-205	ENST00000463675	KRTAP5-3	Q6L8H2	238 aa		4.56	□□□□□ -1.68
SNU13-205	ENST00000463675	KRTAP4-2	Q9BYR5	136 aa		4.53	□□□□□ -1.68
SNU13-205	ENST00000463675	PMAIP1	Q13794	54 aa		4.5	□□□□□ -1.69
SNU13-205	ENST00000463675	SVIP	Q8NHG7	77 aa		4.44	□□□□□ -1.7
SNU13-205	ENST00000463675	KRTAP5-2	Q701N4	177 aa		4.41	□□□□□ -1.7
SNU13-205	ENST00000463675	PRAC1	Q96KF2	57 aa		4.4	□□□□□ -1.71
SNU13-205	ENST00000463675	KRTAP5-7	Q6L8G8	165 aa		4.38	□□□□□ -1.71
SNU13-205	ENST00000463675	KRTAP6-2	Q3LI66	62 aa		4.36	□□□□□ -1.71
SNU13-205	ENST00000463675	PRO0628	Q9UI54	55 aa		4.25	□□□□□ -1.73
SNU13-205	ENST00000463675	MT3	P25713	68 aa		4.17	□□□□□ -1.74
SNU13-205	ENST00000463675	OBSCN	Q5VST9	7968 aa		4.15	□□□□□ -1.75
SNU13-205	ENST00000463675	KRTAP5-8	O75690	187 aa		4.13	□□□□□ -1.75
SNU13-205	ENST00000463675	KTN1-AS1	Q86SY8	53 aa		4.07	□□□□□ -1.76
SNU13-205	ENST00000463675		A0A0A0MQY5	61 aa		4.04	□□□□□ -1.76
SNU13-205	ENST00000463675	AHNAK	Q09666	5890 aa	Known RBP	3.94	□□□□□ -1.78
SNU13-205	ENST00000463675	MUC5AC	P98088	5654 aa		3.93	□□□□□ -1.78
SNU13-205	ENST00000463675	KRTAP5-1	Q6L8H4	278 aa		3.93	□□□□□ -1.78
SNU13-205	ENST00000463675	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.92	□□□□□ -1.78
SNU13-205	ENST00000463675	LCE1E	Q5T753	118 aa		3.76	□□□□□ -1.81
SNU13-205	ENST00000463675	LCE1B	Q5T7P3	118 aa		3.64	□□□□□ -1.83
SNU13-205	ENST00000463675	LUZP6	Q538Z0	58 aa		3.6	□□□□□ -1.83
SNU13-205	ENST00000463675	LCE3D	Q9BYE3	92 aa		3.56	□□□□□ -1.84
SNU13-205	ENST00000463675	LCE1C	Q5T751	118 aa		3.5	□□□□□ -1.85
SNU13-205	ENST00000463675	LCE3E	Q5T5B0	92 aa		3.37	□□□□□ -1.87
SNU13-205	ENST00000463675	NDUFAF8	A1L188	74 aa		3.2	□□□□□ -1.9
SNU13-205	ENST00000463675	LCE1F	Q5T754	118 aa		3.2	□□□□□ -1.9
SNU13-205	ENST00000463675	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.2	□□□□□ -1.9
SNU13-205	ENST00000463675	KRTAP5-11	Q6L8G4	156 aa		3.19	□□□□□ -1.9
SNU13-205	ENST00000463675	KRTAP21-2	Q3LI59	83 aa		3	□□□□□ -1.93
SNU13-205	ENST00000463675	KRTAP4-4	Q9BYR3	166 aa		2.8	□□□□□ -1.96
SNU13-205	ENST00000463675	PHGR1	C9JFL3	82 aa		2.75	□□□□□ -1.97
SNU13-205	ENST00000463675	PRM1	P04553	51 aa		2.67	□□□□□ -1.98
SNU13-205	ENST00000463675	MUC19	Q7Z5P9	8384 aa		2.56	□□□□□ -2
SNU13-205	ENST00000463675	INE1	O15225	51 aa		2.38	□□□□□ -2.03
SNU13-205	ENST00000463675	KRTAP21-1	Q3LI58	79 aa		2.01	□□□□□ -2.09
SNU13-205	ENST00000463675	MUC16	Q8WXI7	14507 aa		1.82	□□□□□ -2.12

Retrieved 78 of 20,778 RNA–protein pairs in 114.9 ms