RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 SEC61GP60059 68 aa5.88□□□□□ -1.47
HMGN1-209ENST00000463631 SERP1Q9Y6X1 66 aa5.87□□□□□ -1.47
HMGN1-209ENST00000463631 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
HMGN1-209ENST00000463631 KRTAP20-2Q3LI61 65 aa5.84□□□□□ -1.47
HMGN1-209ENST00000463631 A0A1B0GU33 70 aa5.83□□□□□ -1.48
HMGN1-209ENST00000463631 COA5Q86WW8 74 aa5.83□□□□□ -1.48
HMGN1-209ENST00000463631 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
HMGN1-209ENST00000463631 SPRR5A0A1B0GTR4 108 aa5.79□□□□□ -1.48
HMGN1-209ENST00000463631 KRTAP4-2Q9BYR5 136 aa5.77□□□□□ -1.49
HMGN1-209ENST00000463631 TNP1P09430 55 aa5.75□□□□□ -1.49
HMGN1-209ENST00000463631 KRTAP5-5Q701N2 237 aaPredicted RBP5.75□□□□□ -1.49
HMGN1-209ENST00000463631 SERP2Q8N6R1 65 aa5.7□□□□□ -1.5
HMGN1-209ENST00000463631 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
HMGN1-209ENST00000463631 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
HMGN1-209ENST00000463631 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
HMGN1-209ENST00000463631 A8MU10 97 aa5.61□□□□□ -1.51
HMGN1-209ENST00000463631 K7ERU9 68 aa5.61□□□□□ -1.51
HMGN1-209ENST00000463631 SYNE1Q8NF91 8797 aaKnown RBP5.54□□□□□ -1.52
HMGN1-209ENST00000463631 A0A1B0GU69 56 aa5.53□□□□□ -1.52
HMGN1-209ENST00000463631 KRTAP15-1Q3LI76 137 aa5.5□□□□□ -1.53
HMGN1-209ENST00000463631 H7BZZ5 65 aa5.43□□□□□ -1.54
HMGN1-209ENST00000463631 COX7CP15954 63 aa5.37□□□□□ -1.55
HMGN1-209ENST00000463631 KRTAP5-2Q701N4 177 aa5.35□□□□□ -1.55
HMGN1-209ENST00000463631 AHNAKQ09666 5890 aaKnown RBP5.34□□□□□ -1.56
HMGN1-209ENST00000463631 MUC5ACP98088 5654 aa5.3□□□□□ -1.56
HMGN1-209ENST00000463631 KRTAP5-8O75690 187 aa5.27□□□□□ -1.57
HMGN1-209ENST00000463631 KRTAP25-1Q3LHN0 102 aa5.25□□□□□ -1.57
HMGN1-209ENST00000463631 PRR15LQ9BU68 103 aa5.25□□□□□ -1.57
HMGN1-209ENST00000463631 MUC5BQ9HC84 5762 aaPredicted RBP5.23□□□□□ -1.57
HMGN1-209ENST00000463631 MT1AP04731 61 aa5.21□□□□□ -1.58
HMGN1-209ENST00000463631 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
HMGN1-209ENST00000463631 LCE3CQ5T5A8 94 aa5.16□□□□□ -1.58
HMGN1-209ENST00000463631 LINC01558Q9Y6Z2 57 aa5.1□□□□□ -1.59
HMGN1-209ENST00000463631 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
HMGN1-209ENST00000463631 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
HMGN1-209ENST00000463631 UQCR11O14957 56 aa5.07□□□□□ -1.6
HMGN1-209ENST00000463631 ANAPC13Q9BS18 74 aa5.05□□□□□ -1.6
HMGN1-209ENST00000463631 KRTAP6-2Q3LI66 62 aa5.03□□□□□ -1.6
HMGN1-209ENST00000463631 ATP5EP56381 51 aaPredicted RBP4.99□□□□□ -1.61
HMGN1-209ENST00000463631 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.63
HMGN1-209ENST00000463631 K7ERS5 55 aa4.9□□□□□ -1.63
HMGN1-209ENST00000463631 CCDC179H3BU77 68 aa4.89□□□□□ -1.63
HMGN1-209ENST00000463631 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
HMGN1-209ENST00000463631 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
HMGN1-209ENST00000463631 PCP4P48539 62 aa4.79□□□□□ -1.64
HMGN1-209ENST00000463631 MT3P25713 68 aa4.76□□□□□ -1.65
HMGN1-209ENST00000463631 TMEM258P61165 79 aa4.76□□□□□ -1.65
HMGN1-209ENST00000463631 A0A0A0MQY5 61 aa4.67□□□□□ -1.66
HMGN1-209ENST00000463631 RPS28P62857 69 aaKnown RBP4.62□□□□□ -1.67
HMGN1-209ENST00000463631 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
HMGN1-209ENST00000463631 Q1T7F1 81 aa4.55□□□□□ -1.68
HMGN1-209ENST00000463631 PSPHP1O15172 72 aa4.54□□□□□ -1.68
HMGN1-209ENST00000463631 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
HMGN1-209ENST00000463631 V9GYY9 64 aa4.52□□□□□ -1.69
HMGN1-209ENST00000463631 ROMO1P60602 79 aa4.48□□□□□ -1.69
HMGN1-209ENST00000463631 A6NED7 52 aa4.37□□□□□ -1.71
HMGN1-209ENST00000463631 LCE1BQ5T7P3 118 aa4.21□□□□□ -1.74
HMGN1-209ENST00000463631 LCE1CQ5T751 118 aa4.19□□□□□ -1.74
HMGN1-209ENST00000463631 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
HMGN1-209ENST00000463631 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
HMGN1-209ENST00000463631 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
HMGN1-209ENST00000463631 PRO0628Q9UI54 55 aa3.86□□□□□ -1.79
HMGN1-209ENST00000463631 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
HMGN1-209ENST00000463631 BRK1Q8WUW1 75 aa3.81□□□□□ -1.8
HMGN1-209ENST00000463631 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
HMGN1-209ENST00000463631 PMAIP1Q13794 54 aa3.64□□□□□ -1.83
HMGN1-209ENST00000463631 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
HMGN1-209ENST00000463631 PHGR1C9JFL3 82 aa3.62□□□□□ -1.83
HMGN1-209ENST00000463631 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
HMGN1-209ENST00000463631 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
HMGN1-209ENST00000463631 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
HMGN1-209ENST00000463631 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
HMGN1-209ENST00000463631 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
HMGN1-209ENST00000463631 LUZP6Q538Z0 58 aa2.97□□□□□ -1.93
HMGN1-209ENST00000463631 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
HMGN1-209ENST00000463631 INE1O15225 51 aa2.41□□□□□ -2.02
HMGN1-209ENST00000463631 PRM1P04553 51 aa2.25□□□□□ -2.05
HMGN1-209ENST00000463631 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 7.6 ms