RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 KRTAP5-4Q6L8H1 288 aa7.11□□□□□ -1.27
PDLIM4-205ENST00000463615 KRTAP4-3Q9BYR4 195 aa7.09□□□□□ -1.27
PDLIM4-205ENST00000463615 MT4P47944 62 aa7.08□□□□□ -1.28
PDLIM4-205ENST00000463615 CCDC179H3BU77 68 aa7.07□□□□□ -1.28
PDLIM4-205ENST00000463615 LINC01558Q9Y6Z2 57 aa7.06□□□□□ -1.28
PDLIM4-205ENST00000463615 KRTAP12-3P60328 96 aa6.97□□□□□ -1.29
PDLIM4-205ENST00000463615 KRTAP4-6Q9BYQ5 205 aa6.91□□□□□ -1.3
PDLIM4-205ENST00000463615 UQCR11O14957 56 aa6.9□□□□□ -1.3
PDLIM4-205ENST00000463615 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
PDLIM4-205ENST00000463615 AHNAK2Q8IVF2 5795 aa6.86□□□□□ -1.31
PDLIM4-205ENST00000463615 TMEM258P61165 79 aa6.84□□□□□ -1.31
PDLIM4-205ENST00000463615 KRTAP5-10Q6L8G5 202 aa6.83□□□□□ -1.32
PDLIM4-205ENST00000463615 KRTAP25-1Q3LHN0 102 aa6.79□□□□□ -1.32
PDLIM4-205ENST00000463615 KRTAP5-5Q701N2 237 aaPredicted RBP6.77□□□□□ -1.33
PDLIM4-205ENST00000463615 MIR22HGQ0VDD5 57 aa6.7□□□□□ -1.34
PDLIM4-205ENST00000463615 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
PDLIM4-205ENST00000463615 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
PDLIM4-205ENST00000463615 KRTAP20-2Q3LI61 65 aa6.67□□□□□ -1.34
PDLIM4-205ENST00000463615 KRTAP5-3Q6L8H2 238 aa6.63□□□□□ -1.35
PDLIM4-205ENST00000463615 K7ERS5 55 aa6.61□□□□□ -1.35
PDLIM4-205ENST00000463615 KRTAP23-1A1A580 65 aa6.59□□□□□ -1.35
PDLIM4-205ENST00000463615 KRTAP5-7Q6L8G8 165 aa6.59□□□□□ -1.35
PDLIM4-205ENST00000463615 KRTAP12-4P60329 112 aa6.58□□□□□ -1.36
PDLIM4-205ENST00000463615 LOC100996750A0A140TA64 210 aa6.53□□□□□ -1.36
PDLIM4-205ENST00000463615 V9GYY9 64 aa6.52□□□□□ -1.37
PDLIM4-205ENST00000463615 Q1T7F1 81 aa6.48□□□□□ -1.37
PDLIM4-205ENST00000463615 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
PDLIM4-205ENST00000463615 SYNE1Q8NF91 8797 aaKnown RBP6.45□□□□□ -1.38
PDLIM4-205ENST00000463615 PSPHP1O15172 72 aa6.45□□□□□ -1.38
PDLIM4-205ENST00000463615 LCE3CQ5T5A8 94 aa6.41□□□□□ -1.38
PDLIM4-205ENST00000463615 CDC42SE1Q9NRR8 79 aa6.24□□□□□ -1.41
PDLIM4-205ENST00000463615 A6NED7 52 aa6.23□□□□□ -1.41
PDLIM4-205ENST00000463615 MT1AP04731 61 aa6.23□□□□□ -1.41
PDLIM4-205ENST00000463615 KRTAP5-2Q701N4 177 aa6.21□□□□□ -1.42
PDLIM4-205ENST00000463615 KRTAP6-1Q3LI64 71 aa6.17□□□□□ -1.42
PDLIM4-205ENST00000463615 ROMO1P60602 79 aa6.14□□□□□ -1.43
PDLIM4-205ENST00000463615 KRTAP4-11Q9BYQ6 195 aa6.13□□□□□ -1.43
PDLIM4-205ENST00000463615 RPS28P62857 69 aaKnown RBP6.09□□□□□ -1.43
PDLIM4-205ENST00000463615 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
PDLIM4-205ENST00000463615 KRTAP9-4Q9BYQ2 154 aa6.04□□□□□ -1.44
PDLIM4-205ENST00000463615 PCP4P48539 62 aa6.01□□□□□ -1.45
PDLIM4-205ENST00000463615 KRTAP5-8O75690 187 aa5.94□□□□□ -1.46
PDLIM4-205ENST00000463615 KRTAP6-2Q3LI66 62 aa5.92□□□□□ -1.46
PDLIM4-205ENST00000463615 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.5
PDLIM4-205ENST00000463615 MUC5BQ9HC84 5762 aaPredicted RBP5.7□□□□□ -1.5
PDLIM4-205ENST00000463615 MT3P25713 68 aa5.7□□□□□ -1.5
PDLIM4-205ENST00000463615 MUC5ACP98088 5654 aa5.7□□□□□ -1.5
PDLIM4-205ENST00000463615 AHNAKQ09666 5890 aaKnown RBP5.68□□□□□ -1.5
PDLIM4-205ENST00000463615 KRTAP9-9Q9BYP9 154 aa5.62□□□□□ -1.51
PDLIM4-205ENST00000463615 KRTAP5-1Q6L8H4 278 aa5.58□□□□□ -1.52
PDLIM4-205ENST00000463615 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
PDLIM4-205ENST00000463615 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
PDLIM4-205ENST00000463615 KRTAP4-2Q9BYR5 136 aa5.01□□□□□ -1.61
PDLIM4-205ENST00000463615 LCE1CQ5T751 118 aa4.93□□□□□ -1.62
PDLIM4-205ENST00000463615 LCE1BQ5T7P3 118 aa4.93□□□□□ -1.62
PDLIM4-205ENST00000463615 PMAIP1Q13794 54 aa4.85□□□□□ -1.63
PDLIM4-205ENST00000463615 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
PDLIM4-205ENST00000463615 PRO0628Q9UI54 55 aa4.67□□□□□ -1.66
PDLIM4-205ENST00000463615 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.67
PDLIM4-205ENST00000463615 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.5□□□□□ -1.69
PDLIM4-205ENST00000463615 KRTAP4-12Q9BQ66 201 aa4.5□□□□□ -1.69
PDLIM4-205ENST00000463615 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
PDLIM4-205ENST00000463615 KTN1-AS1Q86SY8 53 aa4.44□□□□□ -1.7
PDLIM4-205ENST00000463615 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
PDLIM4-205ENST00000463615 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
PDLIM4-205ENST00000463615 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
PDLIM4-205ENST00000463615 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
PDLIM4-205ENST00000463615 LUZP6Q538Z0 58 aa4□□□□□ -1.77
PDLIM4-205ENST00000463615 PHGR1C9JFL3 82 aa3.94□□□□□ -1.78
PDLIM4-205ENST00000463615 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
PDLIM4-205ENST00000463615 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
PDLIM4-205ENST00000463615 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
PDLIM4-205ENST00000463615 PRM1P04553 51 aa3.1□□□□□ -1.91
PDLIM4-205ENST00000463615 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
PDLIM4-205ENST00000463615 INE1O15225 51 aa2.65□□□□□ -1.99
PDLIM4-205ENST00000463615 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
PDLIM4-205ENST00000463615 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
PDLIM4-205ENST00000463615 H3BS24 57 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 125.6 ms