RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
PTPN18-208ENST00000462996 KRTAP4-11Q9BYQ6 195 aa6.53□□□□□ -1.36
PTPN18-208ENST00000462996 COX7CP15954 63 aa6.52□□□□□ -1.37
PTPN18-208ENST00000462996 AHNAKQ09666 5890 aaKnown RBP6.51□□□□□ -1.37
PTPN18-208ENST00000462996 MUC5ACP98088 5654 aa6.46□□□□□ -1.37
PTPN18-208ENST00000462996 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
PTPN18-208ENST00000462996 MUC5BQ9HC84 5762 aaPredicted RBP6.43□□□□□ -1.38
PTPN18-208ENST00000462996 H7BZZ5 65 aa6.39□□□□□ -1.39
PTPN18-208ENST00000462996 TNP1P09430 55 aa6.39□□□□□ -1.39
PTPN18-208ENST00000462996 COA5Q86WW8 74 aa6.38□□□□□ -1.39
PTPN18-208ENST00000462996 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
PTPN18-208ENST00000462996 ANAPC13Q9BS18 74 aa6.37□□□□□ -1.39
PTPN18-208ENST00000462996 KRTAP5-8O75690 187 aa6.36□□□□□ -1.39
PTPN18-208ENST00000462996 A0A1B0GU33 70 aa6.32□□□□□ -1.4
PTPN18-208ENST00000462996 SERP1Q9Y6X1 66 aa6.32□□□□□ -1.4
PTPN18-208ENST00000462996 SEC61GP60059 68 aa6.3□□□□□ -1.4
PTPN18-208ENST00000462996 KRTAP5-2Q701N4 177 aa6.29□□□□□ -1.4
PTPN18-208ENST00000462996 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
PTPN18-208ENST00000462996 ATP5EP56381 51 aaPredicted RBP6.17□□□□□ -1.42
PTPN18-208ENST00000462996 A8MU10 97 aa6.15□□□□□ -1.42
PTPN18-208ENST00000462996 OBSCNQ5VST9 7968 aa6.12□□□□□ -1.43
PTPN18-208ENST00000462996 SMIM26A0A096LP01 95 aa6.11□□□□□ -1.43
PTPN18-208ENST00000462996 PCP4P48539 62 aa6.11□□□□□ -1.43
PTPN18-208ENST00000462996 KRTAP9-9Q9BYP9 154 aa6.11□□□□□ -1.43
PTPN18-208ENST00000462996 A0A1B0GU69 56 aa6.07□□□□□ -1.44
PTPN18-208ENST00000462996 TMEM258P61165 79 aa6.05□□□□□ -1.44
PTPN18-208ENST00000462996 KRTAP6-1Q3LI64 71 aa6.04□□□□□ -1.44
PTPN18-208ENST00000462996 MT1AP04731 61 aa6□□□□□ -1.45
PTPN18-208ENST00000462996 PRR15LQ9BU68 103 aa5.96□□□□□ -1.46
PTPN18-208ENST00000462996 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
PTPN18-208ENST00000462996 KRTAP6-2Q3LI66 62 aa5.91□□□□□ -1.46
PTPN18-208ENST00000462996 KRTAP19-4Q3LI73 84 aa5.9□□□□□ -1.46
PTPN18-208ENST00000462996 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
PTPN18-208ENST00000462996 LCE3CQ5T5A8 94 aa5.81□□□□□ -1.48
PTPN18-208ENST00000462996 KRTAP5-1Q6L8H4 278 aa5.79□□□□□ -1.48
PTPN18-208ENST00000462996 UQCR11O14957 56 aa5.76□□□□□ -1.49
PTPN18-208ENST00000462996 KRTAP25-1Q3LHN0 102 aa5.76□□□□□ -1.49
PTPN18-208ENST00000462996 KRTAP15-1Q3LI76 137 aa5.71□□□□□ -1.5
PTPN18-208ENST00000462996 V9GYY9 64 aa5.71□□□□□ -1.5
PTPN18-208ENST00000462996 Q1T7F1 81 aa5.65□□□□□ -1.5
PTPN18-208ENST00000462996 MIR22HGQ0VDD5 57 aa5.62□□□□□ -1.51
PTPN18-208ENST00000462996 PSPHP1O15172 72 aa5.58□□□□□ -1.52
PTPN18-208ENST00000462996 KRTAP9-6A8MVA2 160 aa5.56□□□□□ -1.52
PTPN18-208ENST00000462996 K7ERS5 55 aa5.52□□□□□ -1.53
PTPN18-208ENST00000462996 RPS28P62857 69 aaKnown RBP5.52□□□□□ -1.53
PTPN18-208ENST00000462996 MT3P25713 68 aa5.51□□□□□ -1.53
PTPN18-208ENST00000462996 A6NED7 52 aa5.43□□□□□ -1.54
PTPN18-208ENST00000462996 KRTAP23-1A1A580 65 aa5.4□□□□□ -1.54
PTPN18-208ENST00000462996 CDC42SE1Q9NRR8 79 aa5.24□□□□□ -1.57
PTPN18-208ENST00000462996 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
PTPN18-208ENST00000462996 ROMO1P60602 79 aa5.15□□□□□ -1.59
PTPN18-208ENST00000462996 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
PTPN18-208ENST00000462996 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
PTPN18-208ENST00000462996 LCE1BQ5T7P3 118 aa5.01□□□□□ -1.61
PTPN18-208ENST00000462996 BRK1Q8WUW1 75 aa4.98□□□□□ -1.61
PTPN18-208ENST00000462996 PRO0628Q9UI54 55 aa4.93□□□□□ -1.62
PTPN18-208ENST00000462996 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
PTPN18-208ENST00000462996 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
PTPN18-208ENST00000462996 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
PTPN18-208ENST00000462996 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
PTPN18-208ENST00000462996 KTN1-AS1Q86SY8 53 aa4.55□□□□□ -1.68
PTPN18-208ENST00000462996 H3BS24 57 aa4.5□□□□□ -1.69
PTPN18-208ENST00000462996 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
PTPN18-208ENST00000462996 PHGR1C9JFL3 82 aa4.46□□□□□ -1.7
PTPN18-208ENST00000462996 PRAC1Q96KF2 57 aa4.36□□□□□ -1.71
PTPN18-208ENST00000462996 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
PTPN18-208ENST00000462996 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
PTPN18-208ENST00000462996 KRTAP21-2Q3LI59 83 aa4□□□□□ -1.77
PTPN18-208ENST00000462996 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
PTPN18-208ENST00000462996 MUC19Q7Z5P9 8384 aa3.81□□□□□ -1.8
PTPN18-208ENST00000462996 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
PTPN18-208ENST00000462996 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
PTPN18-208ENST00000462996 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
PTPN18-208ENST00000462996 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
PTPN18-208ENST00000462996 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
PTPN18-208ENST00000462996 INE1O15225 51 aa2.98□□□□□ -1.93
PTPN18-208ENST00000462996 MUC16Q8WXI7 14507 aa2.64□□□□□ -1.99
PTPN18-208ENST00000462996 PRM1P04553 51 aa2.62□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 56.2 ms