RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 PLAC4Q8WY50 150 aa3.56□□□□□ -1.84
RPA3-205ENST00000462723 CAMK2N1Q7Z7J9 78 aa3.53□□□□□ -1.84
RPA3-205ENST00000462723 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
RPA3-205ENST00000462723 MT1BP07438 61 aa3.5□□□□□ -1.85
RPA3-205ENST00000462723 USH2AO75445 5202 aa3.47□□□□□ -1.85
RPA3-205ENST00000462723 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
RPA3-205ENST00000462723 ROMO1P60602 79 aa3.44□□□□□ -1.86
RPA3-205ENST00000462723 PRO2289Q9P1D8 64 aa3.41□□□□□ -1.86
RPA3-205ENST00000462723 C10orf95Q9H7T3 257 aa3.4□□□□□ -1.87
RPA3-205ENST00000462723 MT1XP80297 61 aa3.39□□□□□ -1.87
RPA3-205ENST00000462723 KRTAP25-1Q3LHN0 102 aa3.39□□□□□ -1.87
RPA3-205ENST00000462723 SSPOA2VEC9 5147 aa3.37□□□□□ -1.87
RPA3-205ENST00000462723 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
RPA3-205ENST00000462723 TNP1P09430 55 aa3.34□□□□□ -1.87
RPA3-205ENST00000462723 KRTAP19-6Q3LI70 58 aa3.34□□□□□ -1.87
RPA3-205ENST00000462723 FSIP2Q5CZC0 6907 aa3.32□□□□□ -1.88
RPA3-205ENST00000462723 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
RPA3-205ENST00000462723 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
RPA3-205ENST00000462723 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
RPA3-205ENST00000462723 PP632Q6XCG6 107 aa3.22□□□□□ -1.89
RPA3-205ENST00000462723 LCE3AQ5TA76 89 aa3.18□□□□□ -1.9
RPA3-205ENST00000462723 KRTAP8-1Q8IUC2 63 aa3.12□□□□□ -1.91
RPA3-205ENST00000462723 KMT2DO14686 5537 aa3.11□□□□□ -1.91
RPA3-205ENST00000462723 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.91
RPA3-205ENST00000462723 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
RPA3-205ENST00000462723 KRTAP19-5Q3LI72 72 aa3.06□□□□□ -1.92
RPA3-205ENST00000462723 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
RPA3-205ENST00000462723 KRTAP19-7Q3SYF9 63 aa3.02□□□□□ -1.93
RPA3-205ENST00000462723 MT1EP04732 61 aa2.98□□□□□ -1.93
RPA3-205ENST00000462723 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
RPA3-205ENST00000462723 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
RPA3-205ENST00000462723 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
RPA3-205ENST00000462723 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
RPA3-205ENST00000462723 MT1LQ93083 61 aa2.91□□□□□ -1.94
RPA3-205ENST00000462723 MUC12Q9UKN1 5478 aa2.91□□□□□ -1.94
RPA3-205ENST00000462723 KRTAP19-3Q7Z4W3 81 aa2.88□□□□□ -1.95
RPA3-205ENST00000462723 MT1GP13640 62 aa2.86□□□□□ -1.95
RPA3-205ENST00000462723 MDN1Q9NU22 5596 aa2.84□□□□□ -1.96
RPA3-205ENST00000462723 SPRR2EP22531 72 aa2.83□□□□□ -1.96
RPA3-205ENST00000462723 SPRR2BP35325 72 aa2.83□□□□□ -1.96
RPA3-205ENST00000462723 SPRR2AP35326 72 aa2.83□□□□□ -1.96
RPA3-205ENST00000462723 LUZP6Q538Z0 58 aa2.82□□□□□ -1.96
RPA3-205ENST00000462723 SPRR5A0A1B0GTR4 108 aa2.81□□□□□ -1.96
RPA3-205ENST00000462723 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
RPA3-205ENST00000462723 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
RPA3-205ENST00000462723 MT1MQ8N339 61 aa2.81□□□□□ -1.96
RPA3-205ENST00000462723 NEBP20929 6669 aa2.76□□□□□ -1.97
RPA3-205ENST00000462723 SPRR2DP22532 72 aa2.74□□□□□ -1.97
RPA3-205ENST00000462723 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
RPA3-205ENST00000462723 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
RPA3-205ENST00000462723 DSTQ03001 7570 aaKnown RBP2.63□□□□□ -1.99
RPA3-205ENST00000462723 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
RPA3-205ENST00000462723 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
RPA3-205ENST00000462723 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
RPA3-205ENST00000462723 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
RPA3-205ENST00000462723 KRTAP2-1Q9BYU5 128 aa2.52□□□□□ -2.01
RPA3-205ENST00000462723 INE1O15225 51 aa2.51□□□□□ -2.01
RPA3-205ENST00000462723 MT1AP04731 61 aa2.49□□□□□ -2.01
RPA3-205ENST00000462723 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
RPA3-205ENST00000462723 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
RPA3-205ENST00000462723 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
RPA3-205ENST00000462723 SYNE1Q8NF91 8797 aaKnown RBP2.39□□□□□ -2.03
RPA3-205ENST00000462723 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
RPA3-205ENST00000462723 MT4P47944 62 aa2.37□□□□□ -2.03
RPA3-205ENST00000462723 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
RPA3-205ENST00000462723 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
RPA3-205ENST00000462723 KRTAP6-2Q3LI66 62 aa2.27□□□□□ -2.05
RPA3-205ENST00000462723 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
RPA3-205ENST00000462723 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
RPA3-205ENST00000462723 KRTAP5-10Q6L8G5 202 aa2.04□□□□□ -2.08
RPA3-205ENST00000462723 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
RPA3-205ENST00000462723 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
RPA3-205ENST00000462723 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
RPA3-205ENST00000462723 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
RPA3-205ENST00000462723 PRM1P04553 51 aa1.78□□□□□ -2.12
RPA3-205ENST00000462723 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
RPA3-205ENST00000462723 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
RPA3-205ENST00000462723 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 96.8 ms