RNA–Protein interactions for RNA: ENST00000462616.1

PMPCA-205, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 3,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-205ENST00000462616 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
PMPCA-205ENST00000462616 KRTAP9-6A0A140TA67 174 aa4.49□□□□□ -1.69
PMPCA-205ENST00000462616 MT1LQ93083 61 aa4.45□□□□□ -1.7
PMPCA-205ENST00000462616 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
PMPCA-205ENST00000462616 LOC100996750A0A140TA64 210 aa4.43□□□□□ -1.7
PMPCA-205ENST00000462616 MT1EP04732 61 aa4.41□□□□□ -1.7
PMPCA-205ENST00000462616 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
PMPCA-205ENST00000462616 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
PMPCA-205ENST00000462616 MUC12Q9UKN1 5478 aa4.34□□□□□ -1.71
PMPCA-205ENST00000462616 MT1GP13640 62 aa4.34□□□□□ -1.71
PMPCA-205ENST00000462616 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
PMPCA-205ENST00000462616 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
PMPCA-205ENST00000462616 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.2□□□□□ -1.74
PMPCA-205ENST00000462616 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
PMPCA-205ENST00000462616 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
PMPCA-205ENST00000462616 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.75
PMPCA-205ENST00000462616 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
PMPCA-205ENST00000462616 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
PMPCA-205ENST00000462616 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
PMPCA-205ENST00000462616 MT1MQ8N339 61 aa4.12□□□□□ -1.75
PMPCA-205ENST00000462616 KRTAP4-9Q9BYQ8 210 aa4.11□□□□□ -1.75
PMPCA-205ENST00000462616 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
PMPCA-205ENST00000462616 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
PMPCA-205ENST00000462616 KRTAP9-7A8MTY7 169 aa3.99□□□□□ -1.77
PMPCA-205ENST00000462616 SYNE2Q8WXH0 6885 aaKnown RBP3.98□□□□□ -1.77
PMPCA-205ENST00000462616 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
PMPCA-205ENST00000462616 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
PMPCA-205ENST00000462616 SPRR2EP22531 72 aa3.86□□□□□ -1.79
PMPCA-205ENST00000462616 SPRR2BP35325 72 aa3.86□□□□□ -1.79
PMPCA-205ENST00000462616 SPRR2AP35326 72 aa3.86□□□□□ -1.79
PMPCA-205ENST00000462616 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
PMPCA-205ENST00000462616 LCE3DQ9BYE3 92 aa3.85□□□□□ -1.79
PMPCA-205ENST00000462616 PRM1P04553 51 aa3.82□□□□□ -1.8
PMPCA-205ENST00000462616 NEBP20929 6669 aa3.81□□□□□ -1.8
PMPCA-205ENST00000462616 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
PMPCA-205ENST00000462616 MDN1Q9NU22 5596 aa3.79□□□□□ -1.8
PMPCA-205ENST00000462616 SPRR2DP22532 72 aa3.73□□□□□ -1.81
PMPCA-205ENST00000462616 MT1AP04731 61 aa3.73□□□□□ -1.81
PMPCA-205ENST00000462616 KRTAP5-5Q701N2 237 aaPredicted RBP3.7□□□□□ -1.82
PMPCA-205ENST00000462616 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
PMPCA-205ENST00000462616 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
PMPCA-205ENST00000462616 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
PMPCA-205ENST00000462616 MUC19Q7Z5P9 8384 aa3.55□□□□□ -1.84
PMPCA-205ENST00000462616 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
PMPCA-205ENST00000462616 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
PMPCA-205ENST00000462616 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
PMPCA-205ENST00000462616 LCE4AQ5TA78 99 aa3.45□□□□□ -1.86
PMPCA-205ENST00000462616 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
PMPCA-205ENST00000462616 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
PMPCA-205ENST00000462616 MT3P25713 68 aa3.34□□□□□ -1.87
PMPCA-205ENST00000462616 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
PMPCA-205ENST00000462616 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
PMPCA-205ENST00000462616 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
PMPCA-205ENST00000462616 MT4P47944 62 aa3.16□□□□□ -1.9
PMPCA-205ENST00000462616 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
PMPCA-205ENST00000462616 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
PMPCA-205ENST00000462616 HMCN1Q96RW7 5635 aa3.11□□□□□ -1.91
PMPCA-205ENST00000462616 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
PMPCA-205ENST00000462616 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
PMPCA-205ENST00000462616 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
PMPCA-205ENST00000462616 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
PMPCA-205ENST00000462616 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
PMPCA-205ENST00000462616 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
PMPCA-205ENST00000462616 KRTAP5-10Q6L8G5 202 aa2.81□□□□□ -1.96
PMPCA-205ENST00000462616 KRTAP5-7Q6L8G8 165 aa2.79□□□□□ -1.96
PMPCA-205ENST00000462616 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
PMPCA-205ENST00000462616 KRTAP5-1Q6L8H4 278 aa2.68□□□□□ -1.98
PMPCA-205ENST00000462616 LCE1CQ5T751 118 aa2.57□□□□□ -2
PMPCA-205ENST00000462616 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
PMPCA-205ENST00000462616 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
PMPCA-205ENST00000462616 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.44□□□□□ -2.02
PMPCA-205ENST00000462616 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
PMPCA-205ENST00000462616 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
PMPCA-205ENST00000462616 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
PMPCA-205ENST00000462616 KRTAP5-11Q6L8G4 156 aa2.29□□□□□ -2.04
PMPCA-205ENST00000462616 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
PMPCA-205ENST00000462616 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
PMPCA-205ENST00000462616 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 16.8 ms