RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 LINC01558Q9Y6Z2 57 aa2.11□□□□□ -2.07
PDCD4-204ENST00000462577 PRR15LQ9BU68 103 aa2.1□□□□□ -2.07
PDCD4-204ENST00000462577 SYNE2Q8WXH0 6885 aaKnown RBP2.09□□□□□ -2.08
PDCD4-204ENST00000462577 SPATA8Q6RVD6 105 aa2.08□□□□□ -2.08
PDCD4-204ENST00000462577 SMIM26A0A096LP01 95 aa2.07□□□□□ -2.08
PDCD4-204ENST00000462577 KRTAP12-1P59990 96 aa2.07□□□□□ -2.08
PDCD4-204ENST00000462577 CAMK2N1Q7Z7J9 78 aa2.06□□□□□ -2.08
PDCD4-204ENST00000462577 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
PDCD4-204ENST00000462577 A0A0D9SG42 100 aa2.04□□□□□ -2.08
PDCD4-204ENST00000462577 KRTAP8-1Q8IUC2 63 aa2.04□□□□□ -2.08
PDCD4-204ENST00000462577 Q1T7F1 81 aa2.03□□□□□ -2.08
PDCD4-204ENST00000462577 UQCR11O14957 56 aa2.02□□□□□ -2.09
PDCD4-204ENST00000462577 SPINT4Q6UDR6 99 aa2.02□□□□□ -2.09
PDCD4-204ENST00000462577 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
PDCD4-204ENST00000462577 SPRR2FQ96RM1 72 aa2.01□□□□□ -2.09
PDCD4-204ENST00000462577 RPS28P62857 69 aaKnown RBP2□□□□□ -2.09
PDCD4-204ENST00000462577 NEBP20929 6669 aa1.99□□□□□ -2.09
PDCD4-204ENST00000462577 KMT2DO14686 5537 aa1.99□□□□□ -2.09
PDCD4-204ENST00000462577 MIR22HGQ0VDD5 57 aa1.98□□□□□ -2.09
PDCD4-204ENST00000462577 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
PDCD4-204ENST00000462577 PSPHP1O15172 72 aa1.97□□□□□ -2.09
PDCD4-204ENST00000462577 SPRR2EP22531 72 aa1.97□□□□□ -2.09
PDCD4-204ENST00000462577 SPRR2BP35325 72 aa1.97□□□□□ -2.09
PDCD4-204ENST00000462577 SPRR2AP35326 72 aa1.97□□□□□ -2.09
PDCD4-204ENST00000462577 C10orf95Q9H7T3 257 aa1.96□□□□□ -2.1
PDCD4-204ENST00000462577 KRTAP19-7Q3SYF9 63 aa1.95□□□□□ -2.1
PDCD4-204ENST00000462577 TNP1P09430 55 aa1.94□□□□□ -2.1
PDCD4-204ENST00000462577 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
PDCD4-204ENST00000462577 PRO0628Q9UI54 55 aa1.93□□□□□ -2.1
PDCD4-204ENST00000462577 K7ERS5 55 aa1.92□□□□□ -2.1
PDCD4-204ENST00000462577 MT1EP04732 61 aa1.92□□□□□ -2.1
PDCD4-204ENST00000462577 KRTAP2-3P0C7H8 128 aa1.92□□□□□ -2.1
PDCD4-204ENST00000462577 KRTAP2-4Q9BYR9 128 aa1.92□□□□□ -2.1
PDCD4-204ENST00000462577 A6NED7 52 aa1.91□□□□□ -2.1
PDCD4-204ENST00000462577 SPRR2DP22532 72 aa1.9□□□□□ -2.11
PDCD4-204ENST00000462577 KRTAP25-1Q3LHN0 102 aa1.89□□□□□ -2.11
PDCD4-204ENST00000462577 KRTAP19-5Q3LI72 72 aa1.89□□□□□ -2.11
PDCD4-204ENST00000462577 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
PDCD4-204ENST00000462577 LCE1BQ5T7P3 118 aa1.89□□□□□ -2.11
PDCD4-204ENST00000462577 KRTAP19-3Q7Z4W3 81 aa1.89□□□□□ -2.11
PDCD4-204ENST00000462577 LCE3DQ9BYE3 92 aa1.88□□□□□ -2.11
PDCD4-204ENST00000462577 CDC42SE1Q9NRR8 79 aa1.88□□□□□ -2.11
PDCD4-204ENST00000462577 MDN1Q9NU22 5596 aa1.88□□□□□ -2.11
PDCD4-204ENST00000462577 MT1GP13640 62 aa1.86□□□□□ -2.11
PDCD4-204ENST00000462577 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
PDCD4-204ENST00000462577 PP632Q6XCG6 107 aa1.84□□□□□ -2.11
PDCD4-204ENST00000462577 MT1LQ93083 61 aa1.84□□□□□ -2.11
PDCD4-204ENST00000462577 KRTAP12-3P60328 96 aa1.83□□□□□ -2.12
PDCD4-204ENST00000462577 LUZP6Q538Z0 58 aa1.83□□□□□ -2.12
PDCD4-204ENST00000462577 MT1MQ8N339 61 aa1.82□□□□□ -2.12
PDCD4-204ENST00000462577 ROMO1P60602 79 aa1.81□□□□□ -2.12
PDCD4-204ENST00000462577 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
PDCD4-204ENST00000462577 DSTQ03001 7570 aaKnown RBP1.74□□□□□ -2.13
PDCD4-204ENST00000462577 PMAIP1Q13794 54 aa1.72□□□□□ -2.13
PDCD4-204ENST00000462577 BRK1Q8WUW1 75 aa1.72□□□□□ -2.13
PDCD4-204ENST00000462577 SPRR5A0A1B0GTR4 108 aa1.63□□□□□ -2.15
PDCD4-204ENST00000462577 MT4P47944 62 aa1.63□□□□□ -2.15
PDCD4-204ENST00000462577 MT1AP04731 61 aa1.59□□□□□ -2.15
PDCD4-204ENST00000462577 KRTAP12-4P60329 112 aa1.59□□□□□ -2.15
PDCD4-204ENST00000462577 KRTAP20-2Q3LI61 65 aa1.59□□□□□ -2.15
PDCD4-204ENST00000462577 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
PDCD4-204ENST00000462577 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
PDCD4-204ENST00000462577 KRTAP6-1Q3LI64 71 aa1.55□□□□□ -2.16
PDCD4-204ENST00000462577 KTN1-AS1Q86SY8 53 aa1.53□□□□□ -2.16
PDCD4-204ENST00000462577 SYNE1Q8NF91 8797 aaKnown RBP1.53□□□□□ -2.16
PDCD4-204ENST00000462577 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.17
PDCD4-204ENST00000462577 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
PDCD4-204ENST00000462577 GPR98Q8WXG9 6306 aa1.51□□□□□ -2.17
PDCD4-204ENST00000462577 KRTAP6-2Q3LI66 62 aa1.46□□□□□ -2.18
PDCD4-204ENST00000462577 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
PDCD4-204ENST00000462577 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
PDCD4-204ENST00000462577 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
PDCD4-204ENST00000462577 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
PDCD4-204ENST00000462577 INE1O15225 51 aa1.18□□□□□ -2.22
PDCD4-204ENST00000462577 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
PDCD4-204ENST00000462577 PRM1P04553 51 aa0.92□□□□□ -2.26
PDCD4-204ENST00000462577 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
PDCD4-204ENST00000462577 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 79.4 ms