RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 V9GYY9 64 aa6.68□□□□□ -1.34
SLC6A1-204ENST00000462473 PSPHP1O15172 72 aa6.65□□□□□ -1.34
SLC6A1-204ENST00000462473 K7ERS5 55 aa6.62□□□□□ -1.35
SLC6A1-204ENST00000462473 Q1T7F1 81 aa6.62□□□□□ -1.35
SLC6A1-204ENST00000462473 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
SLC6A1-204ENST00000462473 KRTAP4-9Q9BYQ8 210 aa6.57□□□□□ -1.36
SLC6A1-204ENST00000462473 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
SLC6A1-204ENST00000462473 KRTAP4-3Q9BYR4 195 aa6.53□□□□□ -1.36
SLC6A1-204ENST00000462473 LCE4AQ5TA78 99 aa6.44□□□□□ -1.38
SLC6A1-204ENST00000462473 A6NED7 52 aa6.43□□□□□ -1.38
SLC6A1-204ENST00000462473 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
SLC6A1-204ENST00000462473 LCE1DQ5T752 114 aa6.4□□□□□ -1.38
SLC6A1-204ENST00000462473 MT4P47944 62 aa6.37□□□□□ -1.39
SLC6A1-204ENST00000462473 RPS28P62857 69 aaKnown RBP6.31□□□□□ -1.4
SLC6A1-204ENST00000462473 KRTAP5-4Q6L8H1 288 aa6.3□□□□□ -1.4
SLC6A1-204ENST00000462473 KRTAP23-1A1A580 65 aa6.29□□□□□ -1.4
SLC6A1-204ENST00000462473 PCP4P48539 62 aa6.29□□□□□ -1.4
SLC6A1-204ENST00000462473 CDC42SE1Q9NRR8 79 aa6.26□□□□□ -1.41
SLC6A1-204ENST00000462473 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
SLC6A1-204ENST00000462473 GPR98Q8WXG9 6306 aa6.19□□□□□ -1.42
SLC6A1-204ENST00000462473 KRTAP4-6Q9BYQ5 205 aa6.18□□□□□ -1.42
SLC6A1-204ENST00000462473 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
SLC6A1-204ENST00000462473 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
SLC6A1-204ENST00000462473 ROMO1P60602 79 aa6.16□□□□□ -1.42
SLC6A1-204ENST00000462473 KRTAP5-5Q701N2 237 aaPredicted RBP6.09□□□□□ -1.43
SLC6A1-204ENST00000462473 LOC100996750A0A140TA64 210 aa6.07□□□□□ -1.44
SLC6A1-204ENST00000462473 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
SLC6A1-204ENST00000462473 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
SLC6A1-204ENST00000462473 KRTAP20-2Q3LI61 65 aa5.96□□□□□ -1.46
SLC6A1-204ENST00000462473 SPRR5A0A1B0GTR4 108 aa5.95□□□□□ -1.46
SLC6A1-204ENST00000462473 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
SLC6A1-204ENST00000462473 KRTAP5-10Q6L8G5 202 aa5.89□□□□□ -1.47
SLC6A1-204ENST00000462473 SYNE1Q8NF91 8797 aaKnown RBP5.88□□□□□ -1.47
SLC6A1-204ENST00000462473 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
SLC6A1-204ENST00000462473 MT1AP04731 61 aa5.73□□□□□ -1.49
SLC6A1-204ENST00000462473 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
SLC6A1-204ENST00000462473 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
SLC6A1-204ENST00000462473 KRTAP5-7Q6L8G8 165 aa5.66□□□□□ -1.5
SLC6A1-204ENST00000462473 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
SLC6A1-204ENST00000462473 KRTAP5-2Q701N4 177 aa5.53□□□□□ -1.52
SLC6A1-204ENST00000462473 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
SLC6A1-204ENST00000462473 KRTAP4-11Q9BYQ6 195 aa5.43□□□□□ -1.54
SLC6A1-204ENST00000462473 KRTAP6-2Q3LI66 62 aa5.42□□□□□ -1.54
SLC6A1-204ENST00000462473 MT3P25713 68 aa5.26□□□□□ -1.57
SLC6A1-204ENST00000462473 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
SLC6A1-204ENST00000462473 KRTAP5-8O75690 187 aa5.24□□□□□ -1.57
SLC6A1-204ENST00000462473 OBSCNQ5VST9 7968 aa5.14□□□□□ -1.59
SLC6A1-204ENST00000462473 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
SLC6A1-204ENST00000462473 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
SLC6A1-204ENST00000462473 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
SLC6A1-204ENST00000462473 MUC5BQ9HC84 5762 aaPredicted RBP4.86□□□□□ -1.63
SLC6A1-204ENST00000462473 PRO0628Q9UI54 55 aa4.85□□□□□ -1.63
SLC6A1-204ENST00000462473 AHNAKQ09666 5890 aaKnown RBP4.84□□□□□ -1.64
SLC6A1-204ENST00000462473 MUC5ACP98088 5654 aa4.84□□□□□ -1.64
SLC6A1-204ENST00000462473 LCE1EQ5T753 118 aa4.78□□□□□ -1.64
SLC6A1-204ENST00000462473 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
SLC6A1-204ENST00000462473 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
SLC6A1-204ENST00000462473 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
SLC6A1-204ENST00000462473 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
SLC6A1-204ENST00000462473 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
SLC6A1-204ENST00000462473 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
SLC6A1-204ENST00000462473 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
SLC6A1-204ENST00000462473 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
SLC6A1-204ENST00000462473 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
SLC6A1-204ENST00000462473 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
SLC6A1-204ENST00000462473 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
SLC6A1-204ENST00000462473 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
SLC6A1-204ENST00000462473 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
SLC6A1-204ENST00000462473 PHGR1C9JFL3 82 aa3.46□□□□□ -1.86
SLC6A1-204ENST00000462473 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
SLC6A1-204ENST00000462473 NDUFAF8A1L188 74 aa3.43□□□□□ -1.86
SLC6A1-204ENST00000462473 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
SLC6A1-204ENST00000462473 PRM1P04553 51 aa3.15□□□□□ -1.91
SLC6A1-204ENST00000462473 INE1O15225 51 aa2.74□□□□□ -1.97
SLC6A1-204ENST00000462473 A0A0A0MQY5 61 aa2.71□□□□□ -1.98
SLC6A1-204ENST00000462473 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
SLC6A1-204ENST00000462473 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
SLC6A1-204ENST00000462473 H3BS24 57 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 54.6 ms