RNA–Protein interactions for RNA: ENST00000462451.1

VAMP5-202, Transcript of vesicle associated membrane protein 5, humanhuman

TSL 2

Gene VAMP5, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP5-202ENST00000462451 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
VAMP5-202ENST00000462451 SPANXA2-OT1Q8N9U9 137 aa3.84□□□□□ -1.79
VAMP5-202ENST00000462451 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
VAMP5-202ENST00000462451 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
VAMP5-202ENST00000462451 SERP1Q9Y6X1 66 aa3.78□□□□□ -1.8
VAMP5-202ENST00000462451 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
VAMP5-202ENST00000462451 A0A1B0GU33 70 aa3.77□□□□□ -1.81
VAMP5-202ENST00000462451 CCDC179H3BU77 68 aa3.77□□□□□ -1.81
VAMP5-202ENST00000462451 H7BZZ5 65 aa3.77□□□□□ -1.81
VAMP5-202ENST00000462451 SEC61GP60059 68 aa3.77□□□□□ -1.81
VAMP5-202ENST00000462451 TNP1P09430 55 aa3.76□□□□□ -1.81
VAMP5-202ENST00000462451 ATP5EP56381 51 aaPredicted RBP3.74□□□□□ -1.81
VAMP5-202ENST00000462451 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
VAMP5-202ENST00000462451 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
VAMP5-202ENST00000462451 LOC100996750A0A140TA64 210 aa3.72□□□□□ -1.81
VAMP5-202ENST00000462451 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
VAMP5-202ENST00000462451 COA5Q86WW8 74 aa3.71□□□□□ -1.82
VAMP5-202ENST00000462451 TMEM258P61165 79 aa3.7□□□□□ -1.82
VAMP5-202ENST00000462451 A8MU10 97 aa3.66□□□□□ -1.82
VAMP5-202ENST00000462451 SMIM26A0A096LP01 95 aa3.64□□□□□ -1.83
VAMP5-202ENST00000462451 PCP4P48539 62 aa3.64□□□□□ -1.83
VAMP5-202ENST00000462451 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
VAMP5-202ENST00000462451 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
VAMP5-202ENST00000462451 A0A1B0GU69 56 aa3.53□□□□□ -1.84
VAMP5-202ENST00000462451 PRR15LQ9BU68 103 aa3.53□□□□□ -1.84
VAMP5-202ENST00000462451 LINC01558Q9Y6Z2 57 aa3.5□□□□□ -1.85
VAMP5-202ENST00000462451 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
VAMP5-202ENST00000462451 KRTAP6-1Q3LI64 71 aa3.49□□□□□ -1.85
VAMP5-202ENST00000462451 V9GYY9 64 aa3.49□□□□□ -1.85
VAMP5-202ENST00000462451 RPS28P62857 69 aaKnown RBP3.47□□□□□ -1.85
VAMP5-202ENST00000462451 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
VAMP5-202ENST00000462451 MT1AP04731 61 aa3.46□□□□□ -1.86
VAMP5-202ENST00000462451 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.86
VAMP5-202ENST00000462451 Q1T7F1 81 aa3.43□□□□□ -1.86
VAMP5-202ENST00000462451 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
VAMP5-202ENST00000462451 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
VAMP5-202ENST00000462451 KRTAP9-4Q9BYQ2 154 aa3.41□□□□□ -1.86
VAMP5-202ENST00000462451 UQCR11O14957 56 aa3.39□□□□□ -1.87
VAMP5-202ENST00000462451 KRTAP25-1Q3LHN0 102 aa3.37□□□□□ -1.87
VAMP5-202ENST00000462451 PSPHP1O15172 72 aa3.36□□□□□ -1.87
VAMP5-202ENST00000462451 KRTAP15-1Q3LI76 137 aa3.36□□□□□ -1.87
VAMP5-202ENST00000462451 MIR22HGQ0VDD5 57 aa3.32□□□□□ -1.88
VAMP5-202ENST00000462451 KRTAP5-1Q6L8H4 278 aa3.31□□□□□ -1.88
VAMP5-202ENST00000462451 A6NED7 52 aa3.29□□□□□ -1.88
VAMP5-202ENST00000462451 K7ERS5 55 aa3.26□□□□□ -1.89
VAMP5-202ENST00000462451 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
VAMP5-202ENST00000462451 KRTAP23-1A1A580 65 aa3.22□□□□□ -1.89
VAMP5-202ENST00000462451 CDC42SE1Q9NRR8 79 aa3.2□□□□□ -1.9
VAMP5-202ENST00000462451 MT3P25713 68 aa3.19□□□□□ -1.9
VAMP5-202ENST00000462451 KRTAP4-12Q9BQ66 201 aa3.13□□□□□ -1.91
VAMP5-202ENST00000462451 SVIPQ8NHG7 77 aa3.1□□□□□ -1.91
VAMP5-202ENST00000462451 BRK1Q8WUW1 75 aa3.08□□□□□ -1.92
VAMP5-202ENST00000462451 ROMO1P60602 79 aa3.04□□□□□ -1.92
VAMP5-202ENST00000462451 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
VAMP5-202ENST00000462451 PMAIP1Q13794 54 aa2.91□□□□□ -1.94
VAMP5-202ENST00000462451 PRO0628Q9UI54 55 aa2.91□□□□□ -1.94
VAMP5-202ENST00000462451 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
VAMP5-202ENST00000462451 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
VAMP5-202ENST00000462451 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
VAMP5-202ENST00000462451 KTN1-AS1Q86SY8 53 aa2.74□□□□□ -1.97
VAMP5-202ENST00000462451 PRAC1Q96KF2 57 aa2.71□□□□□ -1.98
VAMP5-202ENST00000462451 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
VAMP5-202ENST00000462451 H3BS24 57 aa2.61□□□□□ -1.99
VAMP5-202ENST00000462451 LCE1FQ5T754 118 aa2.57□□□□□ -2
VAMP5-202ENST00000462451 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
VAMP5-202ENST00000462451 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
VAMP5-202ENST00000462451 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
VAMP5-202ENST00000462451 LUZP6Q538Z0 58 aa2.33□□□□□ -2.04
VAMP5-202ENST00000462451 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
VAMP5-202ENST00000462451 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
VAMP5-202ENST00000462451 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
VAMP5-202ENST00000462451 LCE3EQ5T5B0 92 aa2.17□□□□□ -2.06
VAMP5-202ENST00000462451 NDUFAF8A1L188 74 aa2.05□□□□□ -2.08
VAMP5-202ENST00000462451 A0A0A0MQY5 61 aa2□□□□□ -2.09
VAMP5-202ENST00000462451 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
VAMP5-202ENST00000462451 INE1O15225 51 aa1.75□□□□□ -2.13
VAMP5-202ENST00000462451 PRM1P04553 51 aa1.55□□□□□ -2.16
VAMP5-202ENST00000462451 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 56.5 ms