RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 PRO2289Q9P1D8 64 aa2.34□□□□□ -2.03
VPS36-202ENST00000462289 PRO0628Q9UI54 55 aa2.32□□□□□ -2.04
VPS36-202ENST00000462289 LINC01558Q9Y6Z2 57 aa2.32□□□□□ -2.04
VPS36-202ENST00000462289 KMT2DO14686 5537 aa2.31□□□□□ -2.04
VPS36-202ENST00000462289 A0A1B0GU33 70 aa2.3□□□□□ -2.04
VPS36-202ENST00000462289 LINC01554Q52M75 96 aa2.3□□□□□ -2.04
VPS36-202ENST00000462289 KRTAP12-1P59990 96 aa2.29□□□□□ -2.04
VPS36-202ENST00000462289 SERP1Q9Y6X1 66 aa2.29□□□□□ -2.04
VPS36-202ENST00000462289 NEBP20929 6669 aa2.28□□□□□ -2.04
VPS36-202ENST00000462289 A0A1B0GU69 56 aa2.28□□□□□ -2.04
VPS36-202ENST00000462289 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
VPS36-202ENST00000462289 MUC12Q9UKN1 5478 aa2.28□□□□□ -2.04
VPS36-202ENST00000462289 SPATA8Q6RVD6 105 aa2.27□□□□□ -2.05
VPS36-202ENST00000462289 RPS28P62857 69 aaKnown RBP2.26□□□□□ -2.05
VPS36-202ENST00000462289 Q1T7F1 81 aa2.24□□□□□ -2.05
VPS36-202ENST00000462289 PP632Q6XCG6 107 aa2.24□□□□□ -2.05
VPS36-202ENST00000462289 MDN1Q9NU22 5596 aa2.23□□□□□ -2.05
VPS36-202ENST00000462289 SMIM26A0A096LP01 95 aa2.23□□□□□ -2.05
VPS36-202ENST00000462289 PRR15LQ9BU68 103 aa2.23□□□□□ -2.05
VPS36-202ENST00000462289 A0A0D9SG42 100 aa2.21□□□□□ -2.06
VPS36-202ENST00000462289 KRTAP8-1Q8IUC2 63 aa2.21□□□□□ -2.06
VPS36-202ENST00000462289 PMAIP1Q13794 54 aa2.2□□□□□ -2.06
VPS36-202ENST00000462289 UQCR11O14957 56 aa2.19□□□□□ -2.06
VPS36-202ENST00000462289 KRTAP19-7Q3SYF9 63 aa2.19□□□□□ -2.06
VPS36-202ENST00000462289 CAMK2N1Q7Z7J9 78 aa2.19□□□□□ -2.06
VPS36-202ENST00000462289 SPRR2FQ96RM1 72 aa2.18□□□□□ -2.06
VPS36-202ENST00000462289 C10orf95Q9H7T3 257 aa2.18□□□□□ -2.06
VPS36-202ENST00000462289 SPINT4Q6UDR6 99 aa2.17□□□□□ -2.06
VPS36-202ENST00000462289 MT1EP04732 61 aa2.14□□□□□ -2.07
VPS36-202ENST00000462289 PSPHP1O15172 72 aa2.13□□□□□ -2.07
VPS36-202ENST00000462289 MIR22HGQ0VDD5 57 aa2.13□□□□□ -2.07
VPS36-202ENST00000462289 SPRR2EP22531 72 aa2.12□□□□□ -2.07
VPS36-202ENST00000462289 SPRR2BP35325 72 aa2.12□□□□□ -2.07
VPS36-202ENST00000462289 SPRR2AP35326 72 aa2.12□□□□□ -2.07
VPS36-202ENST00000462289 TNP1P09430 55 aa2.1□□□□□ -2.07
VPS36-202ENST00000462289 KRTAP2-3P0C7H8 128 aa2.09□□□□□ -2.07
VPS36-202ENST00000462289 KRTAP20-1Q3LI63 56 aa2.09□□□□□ -2.07
VPS36-202ENST00000462289 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.07
VPS36-202ENST00000462289 KRTAP19-3Q7Z4W3 81 aa2.09□□□□□ -2.07
VPS36-202ENST00000462289 KRTAP2-4Q9BYR9 128 aa2.09□□□□□ -2.07
VPS36-202ENST00000462289 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
VPS36-202ENST00000462289 KTN1-AS1Q86SY8 53 aa2.08□□□□□ -2.08
VPS36-202ENST00000462289 KRTAP25-1Q3LHN0 102 aa2.06□□□□□ -2.08
VPS36-202ENST00000462289 MT1LQ93083 61 aa2.06□□□□□ -2.08
VPS36-202ENST00000462289 MT1GP13640 62 aa2.05□□□□□ -2.08
VPS36-202ENST00000462289 SPRR2DP22532 72 aa2.05□□□□□ -2.08
VPS36-202ENST00000462289 CDC42SE1Q9NRR8 79 aa2.05□□□□□ -2.08
VPS36-202ENST00000462289 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
VPS36-202ENST00000462289 A6NED7 52 aa2.04□□□□□ -2.08
VPS36-202ENST00000462289 DSTQ03001 7570 aaKnown RBP2.04□□□□□ -2.08
VPS36-202ENST00000462289 KRTAP2-1Q9BYU5 128 aa2.03□□□□□ -2.08
VPS36-202ENST00000462289 K7ERS5 55 aa2.02□□□□□ -2.09
VPS36-202ENST00000462289 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
VPS36-202ENST00000462289 MT1MQ8N339 61 aa2.01□□□□□ -2.09
VPS36-202ENST00000462289 BRK1Q8WUW1 75 aa2.01□□□□□ -2.09
VPS36-202ENST00000462289 ROMO1P60602 79 aa1.96□□□□□ -2.1
VPS36-202ENST00000462289 SPRR5A0A1B0GTR4 108 aa1.9□□□□□ -2.11
VPS36-202ENST00000462289 LUZP6Q538Z0 58 aa1.87□□□□□ -2.11
VPS36-202ENST00000462289 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.12
VPS36-202ENST00000462289 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
VPS36-202ENST00000462289 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
VPS36-202ENST00000462289 MT4P47944 62 aa1.76□□□□□ -2.13
VPS36-202ENST00000462289 KRTAP20-2Q3LI61 65 aa1.76□□□□□ -2.13
VPS36-202ENST00000462289 MT1AP04731 61 aa1.75□□□□□ -2.13
VPS36-202ENST00000462289 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
VPS36-202ENST00000462289 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
VPS36-202ENST00000462289 KRTAP12-4P60329 112 aa1.72□□□□□ -2.13
VPS36-202ENST00000462289 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
VPS36-202ENST00000462289 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
VPS36-202ENST00000462289 KRTAP6-2Q3LI66 62 aa1.61□□□□□ -2.15
VPS36-202ENST00000462289 INE1O15225 51 aa1.49□□□□□ -2.17
VPS36-202ENST00000462289 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
VPS36-202ENST00000462289 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
VPS36-202ENST00000462289 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
VPS36-202ENST00000462289 PHGR1C9JFL3 82 aa1.06□□□□□ -2.24
VPS36-202ENST00000462289 PRM1P04553 51 aa0.99□□□□□ -2.25
VPS36-202ENST00000462289 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
VPS36-202ENST00000462289 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms