RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 KRTAP19-5Q3LI72 72 aa3.48□□□□□ -1.85
DDX39B-215ENST00000462256 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
DDX39B-215ENST00000462256 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
DDX39B-215ENST00000462256 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.86
DDX39B-215ENST00000462256 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
DDX39B-215ENST00000462256 MT1GP13640 62 aa3.36□□□□□ -1.87
DDX39B-215ENST00000462256 SSPOA2VEC9 5147 aa3.36□□□□□ -1.87
DDX39B-215ENST00000462256 KRTAP19-3Q7Z4W3 81 aa3.32□□□□□ -1.88
DDX39B-215ENST00000462256 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
DDX39B-215ENST00000462256 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
DDX39B-215ENST00000462256 KRTAP19-4Q3LI73 84 aa3.3□□□□□ -1.88
DDX39B-215ENST00000462256 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
DDX39B-215ENST00000462256 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
DDX39B-215ENST00000462256 LCE3BQ5TA77 95 aa3.29□□□□□ -1.88
DDX39B-215ENST00000462256 MT1EP04732 61 aa3.27□□□□□ -1.89
DDX39B-215ENST00000462256 KMT2DO14686 5537 aa3.27□□□□□ -1.89
DDX39B-215ENST00000462256 LCE1AQ5T7P2 110 aa3.25□□□□□ -1.89
DDX39B-215ENST00000462256 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
DDX39B-215ENST00000462256 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.9
DDX39B-215ENST00000462256 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
DDX39B-215ENST00000462256 MT1LQ93083 61 aa3.19□□□□□ -1.9
DDX39B-215ENST00000462256 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
DDX39B-215ENST00000462256 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
DDX39B-215ENST00000462256 KRTAP19-7Q3SYF9 63 aa3.16□□□□□ -1.9
DDX39B-215ENST00000462256 MT1MQ8N339 61 aa3.15□□□□□ -1.91
DDX39B-215ENST00000462256 MT4P47944 62 aa3.12□□□□□ -1.91
DDX39B-215ENST00000462256 NEBP20929 6669 aa3.11□□□□□ -1.91
DDX39B-215ENST00000462256 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
DDX39B-215ENST00000462256 LCE4AQ5TA78 99 aa3.06□□□□□ -1.92
DDX39B-215ENST00000462256 KRTAP4-7Q9BYR0 210 aa3.06□□□□□ -1.92
DDX39B-215ENST00000462256 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
DDX39B-215ENST00000462256 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
DDX39B-215ENST00000462256 LCE5AQ5TCM9 118 aa3.04□□□□□ -1.92
DDX39B-215ENST00000462256 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.93
DDX39B-215ENST00000462256 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
DDX39B-215ENST00000462256 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
DDX39B-215ENST00000462256 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
DDX39B-215ENST00000462256 KRTAP9-4Q9BYQ2 154 aa2.92□□□□□ -1.94
DDX39B-215ENST00000462256 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
DDX39B-215ENST00000462256 LOC100996750A0A140TA64 210 aa2.87□□□□□ -1.95
DDX39B-215ENST00000462256 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
DDX39B-215ENST00000462256 MT1AP04731 61 aa2.81□□□□□ -1.96
DDX39B-215ENST00000462256 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
DDX39B-215ENST00000462256 MT3P25713 68 aa2.8□□□□□ -1.96
DDX39B-215ENST00000462256 LCE1DQ5T752 114 aa2.78□□□□□ -1.96
DDX39B-215ENST00000462256 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
DDX39B-215ENST00000462256 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
DDX39B-215ENST00000462256 KRTAP4-6Q9BYQ5 205 aa2.67□□□□□ -1.98
DDX39B-215ENST00000462256 PRM1P04553 51 aa2.63□□□□□ -1.99
DDX39B-215ENST00000462256 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
DDX39B-215ENST00000462256 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
DDX39B-215ENST00000462256 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
DDX39B-215ENST00000462256 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
DDX39B-215ENST00000462256 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
DDX39B-215ENST00000462256 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
DDX39B-215ENST00000462256 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2
DDX39B-215ENST00000462256 KRTAP5-3Q6L8H2 238 aa2.45□□□□□ -2.02
DDX39B-215ENST00000462256 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
DDX39B-215ENST00000462256 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
DDX39B-215ENST00000462256 KRTAP4-11Q9BYQ6 195 aa2.41□□□□□ -2.02
DDX39B-215ENST00000462256 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
DDX39B-215ENST00000462256 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
DDX39B-215ENST00000462256 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
DDX39B-215ENST00000462256 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
DDX39B-215ENST00000462256 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
DDX39B-215ENST00000462256 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
DDX39B-215ENST00000462256 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
DDX39B-215ENST00000462256 KRTAP4-2Q9BYR5 136 aa2.07□□□□□ -2.08
DDX39B-215ENST00000462256 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
DDX39B-215ENST00000462256 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
DDX39B-215ENST00000462256 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.1
DDX39B-215ENST00000462256 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
DDX39B-215ENST00000462256 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
DDX39B-215ENST00000462256 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
DDX39B-215ENST00000462256 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
DDX39B-215ENST00000462256 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
DDX39B-215ENST00000462256 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
DDX39B-215ENST00000462256 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 13.2 ms