RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 FCGBPQ9Y6R7 5405 aaPredicted RBP4.72□□□□□ -1.65
COL4A6-204ENST00000461897 INE1O15225 51 aa4.64□□□□□ -1.67
COL4A6-204ENST00000461897 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
COL4A6-204ENST00000461897 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
COL4A6-204ENST00000461897 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
COL4A6-204ENST00000461897 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
COL4A6-204ENST00000461897 KRTAP19-7Q3SYF9 63 aa4.52□□□□□ -1.69
COL4A6-204ENST00000461897 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
COL4A6-204ENST00000461897 KRTAP4-9Q9BYQ8 210 aa4.52□□□□□ -1.69
COL4A6-204ENST00000461897 CRCT1Q9UGL9 99 aa4.5□□□□□ -1.69
COL4A6-204ENST00000461897 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
COL4A6-204ENST00000461897 MT1EP04732 61 aa4.43□□□□□ -1.7
COL4A6-204ENST00000461897 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
COL4A6-204ENST00000461897 MUC12Q9UKN1 5478 aa4.41□□□□□ -1.7
COL4A6-204ENST00000461897 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
COL4A6-204ENST00000461897 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
COL4A6-204ENST00000461897 MT1LQ93083 61 aa4.35□□□□□ -1.71
COL4A6-204ENST00000461897 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
COL4A6-204ENST00000461897 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
COL4A6-204ENST00000461897 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
COL4A6-204ENST00000461897 SPRR2FQ96RM1 72 aa4.28□□□□□ -1.72
COL4A6-204ENST00000461897 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
COL4A6-204ENST00000461897 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
COL4A6-204ENST00000461897 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
COL4A6-204ENST00000461897 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
COL4A6-204ENST00000461897 MT1GP13640 62 aa4.18□□□□□ -1.74
COL4A6-204ENST00000461897 MT1MQ8N339 61 aa4.16□□□□□ -1.74
COL4A6-204ENST00000461897 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.74
COL4A6-204ENST00000461897 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
COL4A6-204ENST00000461897 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.76
COL4A6-204ENST00000461897 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
COL4A6-204ENST00000461897 DSTQ03001 7570 aaKnown RBP4.05□□□□□ -1.76
COL4A6-204ENST00000461897 SPRR2EP22531 72 aa4.03□□□□□ -1.76
COL4A6-204ENST00000461897 SPRR2BP35325 72 aa4.03□□□□□ -1.76
COL4A6-204ENST00000461897 SPRR2AP35326 72 aa4.03□□□□□ -1.76
COL4A6-204ENST00000461897 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.78
COL4A6-204ENST00000461897 NEBP20929 6669 aa3.9□□□□□ -1.79
COL4A6-204ENST00000461897 SPRR2DP22532 72 aa3.88□□□□□ -1.79
COL4A6-204ENST00000461897 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
COL4A6-204ENST00000461897 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
COL4A6-204ENST00000461897 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
COL4A6-204ENST00000461897 MT1AP04731 61 aa3.68□□□□□ -1.82
COL4A6-204ENST00000461897 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
COL4A6-204ENST00000461897 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
COL4A6-204ENST00000461897 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
COL4A6-204ENST00000461897 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
COL4A6-204ENST00000461897 KRTAP2-2Q9BYT5 123 aa3.47□□□□□ -1.85
COL4A6-204ENST00000461897 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
COL4A6-204ENST00000461897 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
COL4A6-204ENST00000461897 HMCN1Q96RW7 5635 aa3.39□□□□□ -1.87
COL4A6-204ENST00000461897 MT4P47944 62 aa3.38□□□□□ -1.87
COL4A6-204ENST00000461897 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
COL4A6-204ENST00000461897 MT3P25713 68 aa3.31□□□□□ -1.88
COL4A6-204ENST00000461897 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
COL4A6-204ENST00000461897 PRM1P04553 51 aa3.28□□□□□ -1.88
COL4A6-204ENST00000461897 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
COL4A6-204ENST00000461897 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
COL4A6-204ENST00000461897 OBSCNQ5VST9 7968 aa3.2□□□□□ -1.9
COL4A6-204ENST00000461897 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
COL4A6-204ENST00000461897 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
COL4A6-204ENST00000461897 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
COL4A6-204ENST00000461897 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
COL4A6-204ENST00000461897 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
COL4A6-204ENST00000461897 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
COL4A6-204ENST00000461897 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
COL4A6-204ENST00000461897 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
COL4A6-204ENST00000461897 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
COL4A6-204ENST00000461897 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
COL4A6-204ENST00000461897 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
COL4A6-204ENST00000461897 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
COL4A6-204ENST00000461897 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
COL4A6-204ENST00000461897 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
COL4A6-204ENST00000461897 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
COL4A6-204ENST00000461897 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
COL4A6-204ENST00000461897 LCE1FQ5T754 118 aa2.11□□□□□ -2.07
COL4A6-204ENST00000461897 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
COL4A6-204ENST00000461897 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
COL4A6-204ENST00000461897 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 460.5 ms