RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 KRTAP10-10P60014 251 aa4.6□□□□□ -1.67
SCNM1-204ENST00000461862 LINC01554Q52M75 96 aa4.6□□□□□ -1.67
SCNM1-204ENST00000461862 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.67
SCNM1-204ENST00000461862 KRTAP12-2P59991 146 aa4.58□□□□□ -1.68
SCNM1-204ENST00000461862 SPINT4Q6UDR6 99 aa4.57□□□□□ -1.68
SCNM1-204ENST00000461862 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
SCNM1-204ENST00000461862 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
SCNM1-204ENST00000461862 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
SCNM1-204ENST00000461862 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
SCNM1-204ENST00000461862 ROMO1P60602 79 aa4.47□□□□□ -1.69
SCNM1-204ENST00000461862 KRTAP19-8Q3LI54 63 aa4.47□□□□□ -1.69
SCNM1-204ENST00000461862 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
SCNM1-204ENST00000461862 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
SCNM1-204ENST00000461862 FCGBPQ9Y6R7 5405 aaPredicted RBP4.43□□□□□ -1.7
SCNM1-204ENST00000461862 MT1BP07438 61 aa4.37□□□□□ -1.71
SCNM1-204ENST00000461862 C10orf95Q9H7T3 257 aa4.34□□□□□ -1.71
SCNM1-204ENST00000461862 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
SCNM1-204ENST00000461862 KRTAP19-6Q3LI70 58 aa4.28□□□□□ -1.72
SCNM1-204ENST00000461862 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
SCNM1-204ENST00000461862 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
SCNM1-204ENST00000461862 TNP1P09430 55 aa4.25□□□□□ -1.73
SCNM1-204ENST00000461862 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
SCNM1-204ENST00000461862 PRO2289Q9P1D8 64 aa4.25□□□□□ -1.73
SCNM1-204ENST00000461862 MT1XP80297 61 aa4.24□□□□□ -1.73
SCNM1-204ENST00000461862 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
SCNM1-204ENST00000461862 PP632Q6XCG6 107 aa4.17□□□□□ -1.74
SCNM1-204ENST00000461862 KMT2DO14686 5537 aa4.09□□□□□ -1.76
SCNM1-204ENST00000461862 NEBP20929 6669 aa4.01□□□□□ -1.77
SCNM1-204ENST00000461862 MUC12Q9UKN1 5478 aa4□□□□□ -1.77
SCNM1-204ENST00000461862 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
SCNM1-204ENST00000461862 KRTAP6-3Q3LI67 103 aa3.95□□□□□ -1.78
SCNM1-204ENST00000461862 LCE1CQ5T751 118 aa3.95□□□□□ -1.78
SCNM1-204ENST00000461862 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
SCNM1-204ENST00000461862 MDN1Q9NU22 5596 aa3.9□□□□□ -1.79
SCNM1-204ENST00000461862 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
SCNM1-204ENST00000461862 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
SCNM1-204ENST00000461862 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
SCNM1-204ENST00000461862 SPRR2FQ96RM1 72 aa3.78□□□□□ -1.8
SCNM1-204ENST00000461862 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
SCNM1-204ENST00000461862 MT1EP04732 61 aa3.72□□□□□ -1.81
SCNM1-204ENST00000461862 SPRR2EP22531 72 aa3.69□□□□□ -1.82
SCNM1-204ENST00000461862 SPRR2BP35325 72 aa3.69□□□□□ -1.82
SCNM1-204ENST00000461862 SPRR2AP35326 72 aa3.69□□□□□ -1.82
SCNM1-204ENST00000461862 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
SCNM1-204ENST00000461862 MT1LQ93083 61 aa3.65□□□□□ -1.83
SCNM1-204ENST00000461862 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
SCNM1-204ENST00000461862 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
SCNM1-204ENST00000461862 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
SCNM1-204ENST00000461862 MT1GP13640 62 aa3.55□□□□□ -1.84
SCNM1-204ENST00000461862 SPRR2DP22532 72 aa3.55□□□□□ -1.84
SCNM1-204ENST00000461862 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
SCNM1-204ENST00000461862 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
SCNM1-204ENST00000461862 MT1MQ8N339 61 aa3.5□□□□□ -1.85
SCNM1-204ENST00000461862 DSTQ03001 7570 aaKnown RBP3.46□□□□□ -1.86
SCNM1-204ENST00000461862 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
SCNM1-204ENST00000461862 KRTAP2-1Q9BYU5 128 aa3.41□□□□□ -1.86
SCNM1-204ENST00000461862 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
SCNM1-204ENST00000461862 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
SCNM1-204ENST00000461862 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
SCNM1-204ENST00000461862 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
SCNM1-204ENST00000461862 MT4P47944 62 aa3.15□□□□□ -1.91
SCNM1-204ENST00000461862 GPR98Q8WXG9 6306 aa3.15□□□□□ -1.91
SCNM1-204ENST00000461862 MT1AP04731 61 aa3.12□□□□□ -1.91
SCNM1-204ENST00000461862 AHNAK2Q8IVF2 5795 aa3.07□□□□□ -1.92
SCNM1-204ENST00000461862 KRTAP6-1Q3LI64 71 aa3.05□□□□□ -1.92
SCNM1-204ENST00000461862 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
SCNM1-204ENST00000461862 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
SCNM1-204ENST00000461862 INE1O15225 51 aa2.92□□□□□ -1.94
SCNM1-204ENST00000461862 KRTAP21-2Q3LI59 83 aa2.86□□□□□ -1.95
SCNM1-204ENST00000461862 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
SCNM1-204ENST00000461862 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
SCNM1-204ENST00000461862 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
SCNM1-204ENST00000461862 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
SCNM1-204ENST00000461862 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
SCNM1-204ENST00000461862 PRM1P04553 51 aa2.31□□□□□ -2.04
SCNM1-204ENST00000461862 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
SCNM1-204ENST00000461862 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
SCNM1-204ENST00000461862 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 89.4 ms