RNA–Protein interactions for RNA: ENST00000461841.7

CDH23-208, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 2,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-208ENST00000461841 SYNE2Q8WXH0 6885 aaKnown RBP8.82□□□□□ -1
CDH23-208ENST00000461841 SPRR2FQ96RM1 72 aa8.81□□□□□ -1
CDH23-208ENST00000461841 KRTAP19-3Q7Z4W3 81 aa8.75□□□□□ -1.01
CDH23-208ENST00000461841 MT1GP13640 62 aa8.68□□□□□ -1.02
CDH23-208ENST00000461841 KRTAP9-6A8MVA2 160 aa8.64□□□□□ -1.03
CDH23-208ENST00000461841 KRTAP5-9P26371 169 aa8.62□□□□□ -1.03
CDH23-208ENST00000461841 MT1MQ8N339 61 aa8.61□□□□□ -1.03
CDH23-208ENST00000461841 LCE5AQ5TCM9 118 aa8.58□□□□□ -1.04
CDH23-208ENST00000461841 KRTAP9-6A0A140TA67 174 aa8.56□□□□□ -1.04
CDH23-208ENST00000461841 KRTAP4-3Q9BYR4 195 aa8.53□□□□□ -1.04
CDH23-208ENST00000461841 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.46□□□□□ -1.05
CDH23-208ENST00000461841 MDN1Q9NU22 5596 aa8.45□□□□□ -1.06
CDH23-208ENST00000461841 LCE1AQ5T7P2 110 aa8.4□□□□□ -1.06
CDH23-208ENST00000461841 A0A0A0MQY5 61 aa8.39□□□□□ -1.07
CDH23-208ENST00000461841 KRTAP6-3Q3LI67 103 aa8.32□□□□□ -1.08
CDH23-208ENST00000461841 LOC100996750A0A140TA64 210 aa8.29□□□□□ -1.08
CDH23-208ENST00000461841 DSTQ03001 7570 aaKnown RBP8.29□□□□□ -1.08
CDH23-208ENST00000461841 SPRR2EP22531 72 aa8.27□□□□□ -1.09
CDH23-208ENST00000461841 SPRR2BP35325 72 aa8.27□□□□□ -1.09
CDH23-208ENST00000461841 SPRR2AP35326 72 aa8.27□□□□□ -1.09
CDH23-208ENST00000461841 KRTAP2-3P0C7H8 128 aa8.03□□□□□ -1.12
CDH23-208ENST00000461841 KRTAP2-4Q9BYR9 128 aa8.03□□□□□ -1.12
CDH23-208ENST00000461841 KRTAP2-1Q9BYU5 128 aa8.03□□□□□ -1.12
CDH23-208ENST00000461841 SPRR2DP22532 72 aa7.96□□□□□ -1.14
CDH23-208ENST00000461841 KRTAP9-7A8MTY7 169 aa7.9□□□□□ -1.15
CDH23-208ENST00000461841 NEBP20929 6669 aa7.79□□□□□ -1.16
CDH23-208ENST00000461841 KRTAP5-5Q701N2 237 aaPredicted RBP7.75□□□□□ -1.17
CDH23-208ENST00000461841 INE1O15225 51 aa7.71□□□□□ -1.18
CDH23-208ENST00000461841 MT1AP04731 61 aa7.62□□□□□ -1.19
CDH23-208ENST00000461841 LCE3BQ5TA77 95 aa7.62□□□□□ -1.19
CDH23-208ENST00000461841 KRTAP6-1Q3LI64 71 aa7.62□□□□□ -1.19
CDH23-208ENST00000461841 SYNE1Q8NF91 8797 aaKnown RBP7.4□□□□□ -1.22
CDH23-208ENST00000461841 KRTAP5-4Q6L8H1 288 aa7.26□□□□□ -1.25
CDH23-208ENST00000461841 KRTAP9-4Q9BYQ2 154 aa7.25□□□□□ -1.25
CDH23-208ENST00000461841 KRTAP4-9Q9BYQ8 210 aa7.13□□□□□ -1.27
CDH23-208ENST00000461841 KRTAP12-4P60329 112 aa7.1□□□□□ -1.27
CDH23-208ENST00000461841 KRTAP2-2Q9BYT5 123 aa7.08□□□□□ -1.28
CDH23-208ENST00000461841 LCE4AQ5TA78 99 aa7.01□□□□□ -1.29
CDH23-208ENST00000461841 KRTAP20-1Q3LI63 56 aa7□□□□□ -1.29
CDH23-208ENST00000461841 KRTAP6-2Q3LI66 62 aa6.98□□□□□ -1.29
CDH23-208ENST00000461841 KRTAP4-6Q9BYQ5 205 aa6.95□□□□□ -1.3
CDH23-208ENST00000461841 MT4P47944 62 aa6.94□□□□□ -1.3
CDH23-208ENST00000461841 MT3P25713 68 aa6.89□□□□□ -1.31
CDH23-208ENST00000461841 LCE3DQ9BYE3 92 aa6.83□□□□□ -1.32
CDH23-208ENST00000461841 KRTAP20-2Q3LI61 65 aa6.79□□□□□ -1.32
CDH23-208ENST00000461841 LCE1DQ5T752 114 aa6.77□□□□□ -1.33
CDH23-208ENST00000461841 HMCN1Q96RW7 5635 aa6.76□□□□□ -1.33
CDH23-208ENST00000461841 LCE3EQ5T5B0 92 aa6.66□□□□□ -1.34
CDH23-208ENST00000461841 KRTAP5-2Q701N4 177 aa6.62□□□□□ -1.35
CDH23-208ENST00000461841 OBSCNQ5VST9 7968 aa6.57□□□□□ -1.36
CDH23-208ENST00000461841 KRTAP5-3Q6L8H2 238 aa6.54□□□□□ -1.36
CDH23-208ENST00000461841 PRM1P04553 51 aa5.95□□□□□ -1.46
CDH23-208ENST00000461841 LCE1EQ5T753 118 aa5.92□□□□□ -1.46
CDH23-208ENST00000461841 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
CDH23-208ENST00000461841 AHNAK2Q8IVF2 5795 aa5.78□□□□□ -1.48
CDH23-208ENST00000461841 KRTAP5-1Q6L8H4 278 aa5.72□□□□□ -1.49
CDH23-208ENST00000461841 MUC5ACP98088 5654 aa5.64□□□□□ -1.51
CDH23-208ENST00000461841 LCE1BQ5T7P3 118 aa5.62□□□□□ -1.51
CDH23-208ENST00000461841 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
CDH23-208ENST00000461841 KRTAP5-10Q6L8G5 202 aa5.61□□□□□ -1.51
CDH23-208ENST00000461841 KRTAP4-2Q9BYR5 136 aa5.55□□□□□ -1.52
CDH23-208ENST00000461841 LCE1CQ5T751 118 aa5.55□□□□□ -1.52
CDH23-208ENST00000461841 KRTAP5-7Q6L8G8 165 aa5.45□□□□□ -1.54
CDH23-208ENST00000461841 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.19□□□□□ -1.58
CDH23-208ENST00000461841 GPR98Q8WXG9 6306 aa5.1□□□□□ -1.59
CDH23-208ENST00000461841 KRTAP21-2Q3LI59 83 aa4.99□□□□□ -1.61
CDH23-208ENST00000461841 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
CDH23-208ENST00000461841 MUC5BQ9HC84 5762 aaPredicted RBP4.88□□□□□ -1.63
CDH23-208ENST00000461841 KRTAP5-11Q6L8G4 156 aa4.85□□□□□ -1.63
CDH23-208ENST00000461841 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
CDH23-208ENST00000461841 KRTAP4-4Q9BYR3 166 aa4.45□□□□□ -1.7
CDH23-208ENST00000461841 LCE1FQ5T754 118 aa4.28□□□□□ -1.73
CDH23-208ENST00000461841 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
CDH23-208ENST00000461841 PHGR1C9JFL3 82 aa4.19□□□□□ -1.74
CDH23-208ENST00000461841 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
CDH23-208ENST00000461841 KRTAP21-1Q3LI58 79 aa3.66□□□□□ -1.82
CDH23-208ENST00000461841 MUC16Q8WXI7 14507 aa2.69□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 54.8 ms