RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 SCGB1A1P11684 91 aa0.87□□□□□ -2.27
CLK1-206ENST00000461326 LINC00208Q96KT6 92 aa0.87□□□□□ -2.27
CLK1-206ENST00000461326 K7ERU9 68 aa0.86□□□□□ -2.27
CLK1-206ENST00000461326 ATOX1O00244 68 aa0.86□□□□□ -2.27
CLK1-206ENST00000461326 MT-ATP8P03928 68 aa0.86□□□□□ -2.27
CLK1-206ENST00000461326 KLKP1Q107X0 134 aa0.86□□□□□ -2.27
CLK1-206ENST00000461326 CYP4F30PQ9H0H9 118 aa0.86□□□□□ -2.27
CLK1-206ENST00000461326 NDUFC1O43677 76 aa0.84□□□□□ -2.27
CLK1-206ENST00000461326 CSAG1Q6PB30 78 aa0.84□□□□□ -2.27
CLK1-206ENST00000461326 SSPOA2VEC9 5147 aa0.84□□□□□ -2.28
CLK1-206ENST00000461326 FSIP2Q5CZC0 6907 aa0.82□□□□□ -2.28
CLK1-206ENST00000461326 DMAC1Q96GE9 116 aa0.82□□□□□ -2.28
CLK1-206ENST00000461326 USH2AO75445 5202 aa0.81□□□□□ -2.28
CLK1-206ENST00000461326 CHKB-CPT1BH3BT56 60 aa0.81□□□□□ -2.28
CLK1-206ENST00000461326 ACYP2P14621 99 aa0.81□□□□□ -2.28
CLK1-206ENST00000461326 Q5VV11 94 aa0.81□□□□□ -2.28
CLK1-206ENST00000461326 C20orf197Q8N268 126 aa0.81□□□□□ -2.28
CLK1-206ENST00000461326 SERP2Q8N6R1 65 aa0.81□□□□□ -2.28
CLK1-206ENST00000461326 H0YAA0 97 aa0.8□□□□□ -2.28
CLK1-206ENST00000461326 M0QZ58 72 aa0.8□□□□□ -2.28
CLK1-206ENST00000461326 MT1BP07438 61 aa0.8□□□□□ -2.28
CLK1-206ENST00000461326 KRTAP19-6Q3LI70 58 aa0.8□□□□□ -2.28
CLK1-206ENST00000461326 SPTSSBQ8NFR3 76 aa0.8□□□□□ -2.28
CLK1-206ENST00000461326 BRK1Q8WUW1 75 aa0.8□□□□□ -2.28
CLK1-206ENST00000461326 SPRR2GQ9BYE4 73 aa0.8□□□□□ -2.28
CLK1-206ENST00000461326 CRIPTQ9P021 101 aa0.8□□□□□ -2.28
CLK1-206ENST00000461326 KRTAP19-8Q3LI54 63 aa0.79□□□□□ -2.28
CLK1-206ENST00000461326 PLAC4Q8WY50 150 aa0.79□□□□□ -2.28
CLK1-206ENST00000461326 CCDC179H3BU77 68 aa0.78□□□□□ -2.28
CLK1-206ENST00000461326 H7BZZ5 65 aa0.77□□□□□ -2.29
CLK1-206ENST00000461326 SERP1Q9Y6X1 66 aa0.77□□□□□ -2.29
CLK1-206ENST00000461326 MT1XP80297 61 aa0.76□□□□□ -2.29
CLK1-206ENST00000461326 A0A0D9SG42 100 aa0.75□□□□□ -2.29
CLK1-206ENST00000461326 A0A1B0GU69 56 aa0.75□□□□□ -2.29
CLK1-206ENST00000461326 ATP5EP56381 51 aaPredicted RBP0.75□□□□□ -2.29
CLK1-206ENST00000461326 SPATA8Q6RVD6 105 aa0.75□□□□□ -2.29
CLK1-206ENST00000461326 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
CLK1-206ENST00000461326 KRTAP8-1Q8IUC2 63 aa0.73□□□□□ -2.29
CLK1-206ENST00000461326 SPRR2FQ96RM1 72 aa0.73□□□□□ -2.29
CLK1-206ENST00000461326 PRR15LQ9BU68 103 aa0.73□□□□□ -2.29
CLK1-206ENST00000461326 C10orf95Q9H7T3 257 aa0.73□□□□□ -2.29
CLK1-206ENST00000461326 MACF1Q9UPN3 7388 aaKnown RBP0.73□□□□□ -2.29
CLK1-206ENST00000461326 LINC01558Q9Y6Z2 57 aa0.72□□□□□ -2.29
CLK1-206ENST00000461326 SYNE2Q8WXH0 6885 aaKnown RBP0.71□□□□□ -2.3
CLK1-206ENST00000461326 SPRR2EP22531 72 aa0.71□□□□□ -2.3
CLK1-206ENST00000461326 SPRR2BP35325 72 aa0.71□□□□□ -2.3
CLK1-206ENST00000461326 SPRR2AP35326 72 aa0.71□□□□□ -2.3
CLK1-206ENST00000461326 KMT2DO14686 5537 aa0.7□□□□□ -2.3
CLK1-206ENST00000461326 UQCR11O14957 56 aa0.7□□□□□ -2.3
CLK1-206ENST00000461326 KRTAP20-1Q3LI63 56 aa0.7□□□□□ -2.3
CLK1-206ENST00000461326 KRTAP19-3Q7Z4W3 81 aa0.7□□□□□ -2.3
CLK1-206ENST00000461326 SPRR2DP22532 72 aa0.69□□□□□ -2.3
CLK1-206ENST00000461326 MDN1Q9NU22 5596 aa0.68□□□□□ -2.3
CLK1-206ENST00000461326 TNP1P09430 55 aa0.68□□□□□ -2.3
CLK1-206ENST00000461326 KRTAP19-5Q3LI72 72 aa0.68□□□□□ -2.3
CLK1-206ENST00000461326 MUC12Q9UKN1 5478 aa0.68□□□□□ -2.3
CLK1-206ENST00000461326 MT1EP04732 61 aa0.67□□□□□ -2.3
CLK1-206ENST00000461326 KRTAP2-3P0C7H8 128 aa0.67□□□□□ -2.3
CLK1-206ENST00000461326 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
CLK1-206ENST00000461326 KRTAP2-4Q9BYR9 128 aa0.67□□□□□ -2.3
CLK1-206ENST00000461326 MT1LQ93083 61 aa0.65□□□□□ -2.31
CLK1-206ENST00000461326 KRTAP2-1Q9BYU5 128 aa0.65□□□□□ -2.31
CLK1-206ENST00000461326 MT1GP13640 62 aa0.64□□□□□ -2.31
CLK1-206ENST00000461326 MT1MQ8N339 61 aa0.64□□□□□ -2.31
CLK1-206ENST00000461326 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
CLK1-206ENST00000461326 NEBP20929 6669 aa0.64□□□□□ -2.31
CLK1-206ENST00000461326 MUC5BQ9HC84 5762 aaPredicted RBP0.61□□□□□ -2.31
CLK1-206ENST00000461326 MT4P47944 62 aa0.6□□□□□ -2.31
CLK1-206ENST00000461326 DSTQ03001 7570 aaKnown RBP0.6□□□□□ -2.31
CLK1-206ENST00000461326 KRTAP20-2Q3LI61 65 aa0.56□□□□□ -2.32
CLK1-206ENST00000461326 KRTAP6-1Q3LI64 71 aa0.55□□□□□ -2.32
CLK1-206ENST00000461326 SYNE1Q8NF91 8797 aaKnown RBP0.54□□□□□ -2.32
CLK1-206ENST00000461326 MT1AP04731 61 aa0.54□□□□□ -2.32
CLK1-206ENST00000461326 KRTAP6-2Q3LI66 62 aa0.52□□□□□ -2.33
CLK1-206ENST00000461326 KRTAP21-1Q3LI58 79 aa0.51□□□□□ -2.33
CLK1-206ENST00000461326 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
CLK1-206ENST00000461326 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
CLK1-206ENST00000461326 PRM1P04553 51 aa0.33□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 121.4 ms