RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 MIR22HGQ0VDD5 57 aa2.55□□□□□ -2
NUP98-208ENST00000461047 CAMK2N1Q7Z7J9 78 aa2.55□□□□□ -2
NUP98-208ENST00000461047 A6NED7 52 aa2.54□□□□□ -2
NUP98-208ENST00000461047 KRTAP19-6Q3LI70 58 aa2.54□□□□□ -2
NUP98-208ENST00000461047 KRTAP13-4Q3LI77 160 aa2.54□□□□□ -2
NUP98-208ENST00000461047 SPINT4Q6UDR6 99 aa2.54□□□□□ -2
NUP98-208ENST00000461047 KRTAP12-1P59990 96 aa2.48□□□□□ -2.01
NUP98-208ENST00000461047 MT1XP80297 61 aa2.44□□□□□ -2.02
NUP98-208ENST00000461047 CDC42SE1Q9NRR8 79 aa2.44□□□□□ -2.02
NUP98-208ENST00000461047 FSIP2Q5CZC0 6907 aa2.42□□□□□ -2.02
NUP98-208ENST00000461047 USH2AO75445 5202 aa2.42□□□□□ -2.02
NUP98-208ENST00000461047 TNP1P09430 55 aa2.39□□□□□ -2.03
NUP98-208ENST00000461047 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
NUP98-208ENST00000461047 BRK1Q8WUW1 75 aa2.38□□□□□ -2.03
NUP98-208ENST00000461047 KRTAP5-2Q701N4 177 aa2.37□□□□□ -2.03
NUP98-208ENST00000461047 FCGBPQ9Y6R7 5405 aaPredicted RBP2.34□□□□□ -2.03
NUP98-208ENST00000461047 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
NUP98-208ENST00000461047 C10orf95Q9H7T3 257 aa2.34□□□□□ -2.03
NUP98-208ENST00000461047 SSPOA2VEC9 5147 aa2.34□□□□□ -2.04
NUP98-208ENST00000461047 ROMO1P60602 79 aa2.33□□□□□ -2.04
NUP98-208ENST00000461047 KRTAP6-3Q3LI67 103 aa2.33□□□□□ -2.04
NUP98-208ENST00000461047 KRTAP8-1Q8IUC2 63 aa2.33□□□□□ -2.04
NUP98-208ENST00000461047 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
NUP98-208ENST00000461047 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
NUP98-208ENST00000461047 PMAIP1Q13794 54 aa2.27□□□□□ -2.05
NUP98-208ENST00000461047 SPRR2FQ96RM1 72 aa2.26□□□□□ -2.05
NUP98-208ENST00000461047 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
NUP98-208ENST00000461047 PRO0628Q9UI54 55 aa2.25□□□□□ -2.05
NUP98-208ENST00000461047 MACF1Q9UPN3 7388 aaKnown RBP2.23□□□□□ -2.05
NUP98-208ENST00000461047 SYNE2Q8WXH0 6885 aaKnown RBP2.2□□□□□ -2.06
NUP98-208ENST00000461047 SPRR2EP22531 72 aa2.19□□□□□ -2.06
NUP98-208ENST00000461047 SPRR2BP35325 72 aa2.19□□□□□ -2.06
NUP98-208ENST00000461047 SPRR2AP35326 72 aa2.19□□□□□ -2.06
NUP98-208ENST00000461047 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
NUP98-208ENST00000461047 KRTAP19-5Q3LI72 72 aa2.19□□□□□ -2.06
NUP98-208ENST00000461047 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
NUP98-208ENST00000461047 KRTAP19-7Q3SYF9 63 aa2.17□□□□□ -2.06
NUP98-208ENST00000461047 MT1EP04732 61 aa2.16□□□□□ -2.06
NUP98-208ENST00000461047 MT1GP13640 62 aa2.14□□□□□ -2.07
NUP98-208ENST00000461047 KRTAP19-3Q7Z4W3 81 aa2.13□□□□□ -2.07
NUP98-208ENST00000461047 SPRR2DP22532 72 aa2.12□□□□□ -2.07
NUP98-208ENST00000461047 KTN1-AS1Q86SY8 53 aa2.1□□□□□ -2.07
NUP98-208ENST00000461047 MT1LQ93083 61 aa2.1□□□□□ -2.07
NUP98-208ENST00000461047 KRTAP2-3P0C7H8 128 aa2.09□□□□□ -2.07
NUP98-208ENST00000461047 KRTAP2-4Q9BYR9 128 aa2.09□□□□□ -2.07
NUP98-208ENST00000461047 NEBP20929 6669 aa2.09□□□□□ -2.08
NUP98-208ENST00000461047 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
NUP98-208ENST00000461047 KMT2DO14686 5537 aa2.06□□□□□ -2.08
NUP98-208ENST00000461047 MT1MQ8N339 61 aa2.05□□□□□ -2.08
NUP98-208ENST00000461047 KRTAP2-1Q9BYU5 128 aa2.02□□□□□ -2.09
NUP98-208ENST00000461047 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
NUP98-208ENST00000461047 MUC12Q9UKN1 5478 aa1.97□□□□□ -2.09
NUP98-208ENST00000461047 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
NUP98-208ENST00000461047 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
NUP98-208ENST00000461047 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
NUP98-208ENST00000461047 SPRR5A0A1B0GTR4 108 aa1.87□□□□□ -2.11
NUP98-208ENST00000461047 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
NUP98-208ENST00000461047 LUZP6Q538Z0 58 aa1.84□□□□□ -2.11
NUP98-208ENST00000461047 MT4P47944 62 aa1.82□□□□□ -2.12
NUP98-208ENST00000461047 DSTQ03001 7570 aaKnown RBP1.82□□□□□ -2.12
NUP98-208ENST00000461047 MT1AP04731 61 aa1.81□□□□□ -2.12
NUP98-208ENST00000461047 KRTAP6-1Q3LI64 71 aa1.75□□□□□ -2.13
NUP98-208ENST00000461047 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
NUP98-208ENST00000461047 KRTAP6-2Q3LI66 62 aa1.66□□□□□ -2.14
NUP98-208ENST00000461047 SYNE1Q8NF91 8797 aaKnown RBP1.65□□□□□ -2.14
NUP98-208ENST00000461047 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
NUP98-208ENST00000461047 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
NUP98-208ENST00000461047 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
NUP98-208ENST00000461047 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
NUP98-208ENST00000461047 GPR98Q8WXG9 6306 aa1.52□□□□□ -2.17
NUP98-208ENST00000461047 INE1O15225 51 aa1.37□□□□□ -2.19
NUP98-208ENST00000461047 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
NUP98-208ENST00000461047 AHNAKQ09666 5890 aaKnown RBP1.26□□□□□ -2.21
NUP98-208ENST00000461047 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
NUP98-208ENST00000461047 PRM1P04553 51 aa1.17□□□□□ -2.22
NUP98-208ENST00000461047 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
NUP98-208ENST00000461047 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
NUP98-208ENST00000461047 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms