RNA–Protein interactions for RNA: ENST00000460834.1

LST1-218, leukocyte specific transcript 1, humanhuman

TSL 3

Gene LST1, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-218ENST00000460834 KRTAP4-3Q9BYR4 195 aa6.63□□□□□ -1.35
LST1-218ENST00000460834 MIR22HGQ0VDD5 57 aa6.62□□□□□ -1.35
LST1-218ENST00000460834 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
LST1-218ENST00000460834 PCP4P48539 62 aa6.55□□□□□ -1.36
LST1-218ENST00000460834 PSPHP1O15172 72 aa6.53□□□□□ -1.36
LST1-218ENST00000460834 Q1T7F1 81 aa6.53□□□□□ -1.36
LST1-218ENST00000460834 V9GYY9 64 aa6.51□□□□□ -1.37
LST1-218ENST00000460834 KRTAP4-7Q9BYR0 210 aa6.5□□□□□ -1.37
LST1-218ENST00000460834 GPR98Q8WXG9 6306 aa6.49□□□□□ -1.37
LST1-218ENST00000460834 LCE1DQ5T752 114 aa6.49□□□□□ -1.37
LST1-218ENST00000460834 LCE4AQ5TA78 99 aa6.49□□□□□ -1.37
LST1-218ENST00000460834 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
LST1-218ENST00000460834 HMCN1Q96RW7 5635 aa6.43□□□□□ -1.38
LST1-218ENST00000460834 KRTAP5-4Q6L8H1 288 aa6.43□□□□□ -1.38
LST1-218ENST00000460834 K7ERS5 55 aa6.4□□□□□ -1.38
LST1-218ENST00000460834 MT4P47944 62 aa6.4□□□□□ -1.38
LST1-218ENST00000460834 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
LST1-218ENST00000460834 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
LST1-218ENST00000460834 A6NED7 52 aa6.26□□□□□ -1.41
LST1-218ENST00000460834 AHNAK2Q8IVF2 5795 aa6.23□□□□□ -1.41
LST1-218ENST00000460834 RPS28P62857 69 aaKnown RBP6.22□□□□□ -1.41
LST1-218ENST00000460834 KRTAP5-5Q701N2 237 aaPredicted RBP6.21□□□□□ -1.42
LST1-218ENST00000460834 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
LST1-218ENST00000460834 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.42
LST1-218ENST00000460834 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
LST1-218ENST00000460834 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
LST1-218ENST00000460834 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
LST1-218ENST00000460834 ROMO1P60602 79 aa6.06□□□□□ -1.44
LST1-218ENST00000460834 KRTAP20-2Q3LI61 65 aa6.04□□□□□ -1.44
LST1-218ENST00000460834 KRTAP5-10Q6L8G5 202 aa6.02□□□□□ -1.45
LST1-218ENST00000460834 SPRR5A0A1B0GTR4 108 aa6.01□□□□□ -1.45
LST1-218ENST00000460834 SYNE1Q8NF91 8797 aaKnown RBP6□□□□□ -1.45
LST1-218ENST00000460834 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
LST1-218ENST00000460834 KRTAP5-3Q6L8H2 238 aa5.9□□□□□ -1.46
LST1-218ENST00000460834 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
LST1-218ENST00000460834 MT1AP04731 61 aa5.77□□□□□ -1.49
LST1-218ENST00000460834 KRTAP5-7Q6L8G8 165 aa5.77□□□□□ -1.49
LST1-218ENST00000460834 KRTAP6-1Q3LI64 71 aa5.76□□□□□ -1.49
LST1-218ENST00000460834 KRTAP5-2Q701N4 177 aa5.65□□□□□ -1.5
LST1-218ENST00000460834 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
LST1-218ENST00000460834 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
LST1-218ENST00000460834 KRTAP6-2Q3LI66 62 aa5.47□□□□□ -1.53
LST1-218ENST00000460834 BRK1Q8WUW1 75 aa5.47□□□□□ -1.53
LST1-218ENST00000460834 KRTAP5-8O75690 187 aa5.34□□□□□ -1.55
LST1-218ENST00000460834 MT3P25713 68 aa5.25□□□□□ -1.57
LST1-218ENST00000460834 PRO0628Q9UI54 55 aa5.24□□□□□ -1.57
LST1-218ENST00000460834 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
LST1-218ENST00000460834 PMAIP1Q13794 54 aa5.17□□□□□ -1.58
LST1-218ENST00000460834 AHNAKQ09666 5890 aaKnown RBP5.15□□□□□ -1.59
LST1-218ENST00000460834 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
LST1-218ENST00000460834 MUC5ACP98088 5654 aa5.06□□□□□ -1.6
LST1-218ENST00000460834 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
LST1-218ENST00000460834 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
LST1-218ENST00000460834 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
LST1-218ENST00000460834 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
LST1-218ENST00000460834 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
LST1-218ENST00000460834 SVIPQ8NHG7 77 aa4.65□□□□□ -1.67
LST1-218ENST00000460834 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
LST1-218ENST00000460834 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
LST1-218ENST00000460834 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
LST1-218ENST00000460834 H3BS24 57 aa4.36□□□□□ -1.71
LST1-218ENST00000460834 LCE3DQ9BYE3 92 aa4.36□□□□□ -1.71
LST1-218ENST00000460834 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
LST1-218ENST00000460834 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
LST1-218ENST00000460834 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
LST1-218ENST00000460834 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
LST1-218ENST00000460834 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
LST1-218ENST00000460834 LCE1FQ5T754 118 aa3.92□□□□□ -1.78
LST1-218ENST00000460834 KRTAP21-2Q3LI59 83 aa3.81□□□□□ -1.8
LST1-218ENST00000460834 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
LST1-218ENST00000460834 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
LST1-218ENST00000460834 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
LST1-218ENST00000460834 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
LST1-218ENST00000460834 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
LST1-218ENST00000460834 INE1O15225 51 aa3.14□□□□□ -1.91
LST1-218ENST00000460834 PRM1P04553 51 aa3.11□□□□□ -1.91
LST1-218ENST00000460834 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
LST1-218ENST00000460834 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 37.6 ms