RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 FAT1Q14517 4588 aa1.07□□□□□ -2.24
HPS3-203ENST00000460822 MYCBP2O75592 4640 aa1.07□□□□□ -2.24
HPS3-203ENST00000460822 S4R3F8 94 aa1.07□□□□□ -2.24
HPS3-203ENST00000460822 DNHD1Q96M86 4753 aa1.05□□□□□ -2.24
HPS3-203ENST00000460822 KMT2CQ8NEZ4 4911 aaKnown RBP1.03□□□□□ -2.24
HPS3-203ENST00000460822 LPAP08519 4548 aa1.03□□□□□ -2.25
HPS3-203ENST00000460822 KRTAP10-4P60372 401 aaPredicted RBP1.02□□□□□ -2.25
HPS3-203ENST00000460822 SMR3BP02814 79 aaPredicted RBP1.01□□□□□ -2.25
HPS3-203ENST00000460822 KRTAP4-1Q9BYQ7 146 aa1.01□□□□□ -2.25
HPS3-203ENST00000460822 M0QZ58 72 aa1.01□□□□□ -2.25
HPS3-203ENST00000460822 PLAC4Q8WY50 150 aa1.01□□□□□ -2.25
HPS3-203ENST00000460822 RYR2Q92736 4967 aa1□□□□□ -2.25
HPS3-203ENST00000460822 LRP2P98164 4655 aa1□□□□□ -2.25
HPS3-203ENST00000460822 PCLOQ9Y6V0 5065 aa0.99□□□□□ -2.25
HPS3-203ENST00000460822 FLGP20930 4061 aaPredicted RBP0.98□□□□□ -2.25
HPS3-203ENST00000460822 MUC17Q685J3 4493 aa0.98□□□□□ -2.25
HPS3-203ENST00000460822 RYR1P21817 5038 aa0.98□□□□□ -2.25
HPS3-203ENST00000460822 KIAA1109Q2LD37 5005 aa0.98□□□□□ -2.25
HPS3-203ENST00000460822 ABCA13Q86UQ4 5058 aa0.96□□□□□ -2.26
HPS3-203ENST00000460822 RYR3Q15413 4870 aa0.94□□□□□ -2.26
HPS3-203ENST00000460822 HERC1Q15751 4861 aa0.94□□□□□ -2.26
HPS3-203ENST00000460822 Q5VSD8 79 aa0.93□□□□□ -2.26
HPS3-203ENST00000460822 DSTQ03001 7570 aaKnown RBP0.93□□□□□ -2.26
HPS3-203ENST00000460822 BIRC6Q9NR09 4857 aa0.93□□□□□ -2.26
HPS3-203ENST00000460822 MT1HL1P0DM35 61 aa0.92□□□□□ -2.26
HPS3-203ENST00000460822 TNP1P09430 55 aa0.9□□□□□ -2.26
HPS3-203ENST00000460822 KRTAP19-2Q3LHN2 52 aa0.89□□□□□ -2.27
HPS3-203ENST00000460822 UBR4Q5T4S7 5183 aa0.89□□□□□ -2.27
HPS3-203ENST00000460822 EPPK1P58107 5090 aaKnown RBP0.88□□□□□ -2.27
HPS3-203ENST00000460822 MUC2Q02817 5179 aa0.88□□□□□ -2.27
HPS3-203ENST00000460822 HERC2O95714 4834 aa0.85□□□□□ -2.27
HPS3-203ENST00000460822 FCGBPQ9Y6R7 5405 aaPredicted RBP0.85□□□□□ -2.27
HPS3-203ENST00000460822 FSIP2Q5CZC0 6907 aa0.85□□□□□ -2.27
HPS3-203ENST00000460822 MDN1Q9NU22 5596 aa0.85□□□□□ -2.27
HPS3-203ENST00000460822 FAT4Q6V0I7 4981 aa0.84□□□□□ -2.28
HPS3-203ENST00000460822 KRTAP8-1Q8IUC2 63 aa0.83□□□□□ -2.28
HPS3-203ENST00000460822 SPRR2GQ9BYE4 73 aa0.83□□□□□ -2.28
HPS3-203ENST00000460822 HMCN2Q8NDA2 5059 aa0.83□□□□□ -2.28
HPS3-203ENST00000460822 KMT2DO14686 5537 aa0.82□□□□□ -2.28
HPS3-203ENST00000460822 RNF213Q63HN8 5207 aa0.81□□□□□ -2.28
HPS3-203ENST00000460822 SSPOA2VEC9 5147 aa0.81□□□□□ -2.28
HPS3-203ENST00000460822 KRTAP20-1Q3LI63 56 aa0.81□□□□□ -2.28
HPS3-203ENST00000460822 MT1XP80297 61 aa0.79□□□□□ -2.28
HPS3-203ENST00000460822 KRTAP19-8Q3LI54 63 aa0.79□□□□□ -2.28
HPS3-203ENST00000460822 MT1FP04733 61 aa0.78□□□□□ -2.28
HPS3-203ENST00000460822 MT2AP02795 61 aa0.77□□□□□ -2.29
HPS3-203ENST00000460822 MT1BP07438 61 aa0.77□□□□□ -2.29
HPS3-203ENST00000460822 M0R2T5 61 aa0.76□□□□□ -2.29
HPS3-203ENST00000460822 MT1HP80294 61 aa0.76□□□□□ -2.29
HPS3-203ENST00000460822 KRTAP2-3P0C7H8 128 aa0.76□□□□□ -2.29
HPS3-203ENST00000460822 KRTAP2-4Q9BYR9 128 aa0.76□□□□□ -2.29
HPS3-203ENST00000460822 KRTAP2-1Q9BYU5 128 aa0.76□□□□□ -2.29
HPS3-203ENST00000460822 KRTAP19-5Q3LI72 72 aa0.75□□□□□ -2.29
HPS3-203ENST00000460822 USH2AO75445 5202 aa0.72□□□□□ -2.29
HPS3-203ENST00000460822 KRTAP5-10Q6L8G5 202 aa0.72□□□□□ -2.29
HPS3-203ENST00000460822 KRTAP19-7Q3SYF9 63 aa0.7□□□□□ -2.3
HPS3-203ENST00000460822 MT1LQ93083 61 aa0.68□□□□□ -2.3
HPS3-203ENST00000460822 MT1EP04732 61 aa0.68□□□□□ -2.3
HPS3-203ENST00000460822 KRTAP19-3Q7Z4W3 81 aa0.65□□□□□ -2.31
HPS3-203ENST00000460822 MUC12Q9UKN1 5478 aa0.65□□□□□ -2.31
HPS3-203ENST00000460822 MT1GP13640 62 aa0.65□□□□□ -2.31
HPS3-203ENST00000460822 SYNE1Q8NF91 8797 aaKnown RBP0.64□□□□□ -2.31
HPS3-203ENST00000460822 MT1MQ8N339 61 aa0.63□□□□□ -2.31
HPS3-203ENST00000460822 PRM1P04553 51 aa0.61□□□□□ -2.31
HPS3-203ENST00000460822 MT1AP04731 61 aa0.61□□□□□ -2.31
HPS3-203ENST00000460822 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
HPS3-203ENST00000460822 KRTAP6-1Q3LI64 71 aa0.58□□□□□ -2.32
HPS3-203ENST00000460822 KRTAP19-6Q3LI70 58 aa0.58□□□□□ -2.32
HPS3-203ENST00000460822 KRTAP6-2Q3LI66 62 aa0.57□□□□□ -2.32
HPS3-203ENST00000460822 SPRR2FQ96RM1 72 aa0.56□□□□□ -2.32
HPS3-203ENST00000460822 SPRR2AP35326 72 aa0.52□□□□□ -2.33
HPS3-203ENST00000460822 SPRR2EP22531 72 aa0.51□□□□□ -2.33
HPS3-203ENST00000460822 SPRR2BP35325 72 aa0.49□□□□□ -2.33
HPS3-203ENST00000460822 SPRR2DP22532 72 aa0.48□□□□□ -2.33
HPS3-203ENST00000460822 KRTAP21-1Q3LI58 79 aa0.43□□□□□ -2.34
HPS3-203ENST00000460822 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
HPS3-203ENST00000460822 KRTAP20-2Q3LI61 65 aa0.41□□□□□ -2.34
HPS3-203ENST00000460822 MT4P47944 62 aa0.39□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 133.4 ms